Gene Franean1_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_1115 
Symbol 
ID5669528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp1333332 
End bp1333616 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content71% 
IMG OID641240047 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001505475 
Protein GI158312967 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.545347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.284391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAGT CCCAGTTGGT TGACCGCATC GCCCAGCAGA TCGAGGGTGG GCGGTCGAAC 
GCCACCAAGG CGGTCGACGC GGTGTTCGAC GCGATCCAGG AGGCCGTGGC CGGCGGCGAG
AAGGTCACGA TCACCGGGTT CGGTGTGTTC GAGCGGGTGG AGCGCGCCGC GCGCACGGGC
CGCAACCCCG CGACCGGCGA GCCCGTCCAC GTCGCCGCGT CCGTGGTGCC GAAGTTCCGT
CCCGGCTCGG AGTTCAAGGC CAGCGTCTCG GCCAGCAGCG ACTGA
 
Protein sequence
MNKSQLVDRI AQQIEGGRSN ATKAVDAVFD AIQEAVAGGE KVTITGFGVF ERVERAARTG 
RNPATGEPVH VAASVVPKFR PGSEFKASVS ASSD