157 homologs were found in PanDaTox collection
for query gene Bind_3283 on replicon NC_010581
Organism: Beijerinckia indica subsp. indica ATCC 9039



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010581  Bind_3283  XRE family plasmid maintenance system antidote protein  100 
 
 
102 aa  203  6e-52  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3187  XRE family plasmid maintenance system antidote protein  50 
 
 
94 aa  84.3  4e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0487579  normal 
 
 
-
 
NC_007778  RPB_3236  XRE family plasmid maintenance system antidote protein  48.78 
 
 
94 aa  80.1  0.000000000000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.390775  normal 
 
 
-
 
NC_011666  Msil_2106  XRE family plasmid maintenance system antidote protein  47.13 
 
 
93 aa  78.6  0.00000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010725  Mpop_2927  XRE family plasmid maintenance system antidote protein  40.66 
 
 
97 aa  77.4  0.00000000000006  Methylobacterium populi BJ001  Bacteria  normal  0.225345  normal 
 
 
-
 
NC_008576  Mmc1_2896  XRE family plasmid maintenance system antidote protein  42.86 
 
 
95 aa  77.4  0.00000000000007  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.543418 
 
 
-
 
NC_012560  Avin_27690  plasmid maintenance system antidote protein  40.23 
 
 
99 aa  74.3  0.0000000000005  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5378  addiction module antidote protein  43.02 
 
 
101 aa  73.9  0.0000000000006  Pseudomonas aeruginosa PA7  Bacteria  normal  0.369538  n/a   
 
 
-
 
NC_008463  PA14_61840  putative virulence-associated protein  43.02 
 
 
101 aa  73.6  0.0000000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000756673  hitchhiker  0.00808433 
 
 
-
 
NC_007963  Csal_2881  XRE family plasmid maintenance system antidote protein  40.24 
 
 
96 aa  72.4  0.000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.516447  n/a   
 
 
-
 
NC_007517  Gmet_2972  XRE family plasmid maintenance system antidote protein  44.3 
 
 
101 aa  71.2  0.000000000004  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0043  XRE family plasmid maintenance system antidote protein  45.88 
 
 
99 aa  71.2  0.000000000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3001  XRE family plasmid maintenance system antidote protein  42.5 
 
 
100 aa  69.3  0.00000000002  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.770477 
 
 
-
 
NC_007951  Bxe_A0921  hypothetical protein  51.43 
 
 
151 aa  69.3  0.00000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0224  plasmid maintenance system antidote protein, XRE family  40 
 
 
99 aa  69.3  0.00000000002  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.657872  normal  0.19652 
 
 
-
 
NC_008786  Veis_4131  XRE family plasmid maintenance system antidote protein  45.21 
 
 
102 aa  69.3  0.00000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0937778  normal  0.0702268 
 
 
-
 
NC_009671  Oant_4678  XRE family plasmid maintenance system antidote protein  47.22 
 
 
98 aa  68.6  0.00000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.171358  n/a   
 
 
-
 
NC_010681  Bphyt_3070  XRE family plasmid maintenance system antidote protein  50 
 
 
151 aa  68.6  0.00000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.314371  normal 
 
 
-
 
NC_008740  Maqu_3198  XRE family plasmid maintenance system antidote protein  39.53 
 
 
104 aa  68.2  0.00000000004  Marinobacter aquaeolei VT8  Bacteria  normal  0.562378  n/a   
 
 
-
 
NC_007404  Tbd_0672  plasmid maintenance system antidote protein  45 
 
 
171 aa  67  0.00000000008  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.15068  normal  0.669698 
 
 
-
 
NC_002947  PP_1585  antidote protein, putative  37.21 
 
 
99 aa  67  0.00000000009  Pseudomonas putida KT2440  Bacteria  normal  normal  0.315858 
 
 
-
 
NC_007964  Nham_4027  XRE family plasmid maintenance system antidote protein  41.77 
 
 
101 aa  67  0.00000000009  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4192  XRE family plasmid maintenance system antidote protein  37.21 
 
 
99 aa  66.6  0.0000000001  Pseudomonas putida F1  Bacteria  normal  0.322269  normal 
 
 
-
 
NC_011769  DvMF_1669  XRE family plasmid maintenance system antidote protein  43.37 
 
 
101 aa  65.5  0.0000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011004  Rpal_3616  XRE family plasmid maintenance system antidote protein  40.51 
 
 
100 aa  65.1  0.0000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.322775  n/a   
 
 
-
 
NC_007413  Ava_3243  plasmid maintenance system antidote protein  36 
 
 
102 aa  64.3  0.0000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0211861  normal 
 
 
-
 
NC_011901  Tgr7_2786  XRE family plasmid maintenance system antidote protein  42.11 
 
 
106 aa  64.7  0.0000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  unclonable  0.000000094081  n/a   
 
 
-
 
NC_009483  Gura_0412  XRE family plasmid maintenance system antidote protein  38.96 
 
 
100 aa  64.3  0.0000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1216  XRE family plasmid maintenance system antidote protein  41.56 
 
 
101 aa  64.3  0.0000000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0533  virulence-associated protein I  40.7 
 
 
103 aa  64.3  0.0000000005  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.888429  n/a   
 
 
-
 
NC_010117  COXBURSA331_A1669  addiction module antidote protein  40.7 
 
 
101 aa  64.3  0.0000000005  Coxiella burnetii RSA 331  Bacteria  normal  0.179147  n/a   
 
 
-
 
NC_007925  RPC_4756  XRE family plasmid maintenance system antidote protein  43.04 
 
 
100 aa  64.3  0.0000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0885  XRE family plasmid maintenance system antidote protein  37.5 
 
 
102 aa  63.9  0.0000000006  Chelativorans sp. BNC1  Bacteria  normal  0.673579  n/a   
 
 
-
 
NC_011901  Tgr7_1105  XRE family plasmid maintenance system antidote protein  38.46 
 
 
105 aa  64.3  0.0000000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.912318  n/a   
 
 
-
 
NC_013204  Elen_1062  XRE family plasmid maintenance system antidote protein  37.5 
 
 
102 aa  64.3  0.0000000006  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000765045 
 
 
-
 
NC_008825  Mpe_A2823  putative plasmid maintenance system antidote protein  44 
 
 
167 aa  63.9  0.0000000007  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2763  virulence-associated protein, putative  41.77 
 
 
100 aa  63.9  0.0000000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1535  plasmid maintenance system antidote protein  41.25 
 
 
123 aa  63.9  0.0000000008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0393222  n/a   
 
 
-
 
NC_013174  Jden_0768  XRE family plasmid maintenance system antidote protein  35.9 
 
 
100 aa  63.9  0.0000000008  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_010517  Mrad2831_6421  XRE family plasmid maintenance system antidote protein  38.46 
 
 
78 aa  63.5  0.000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    normal  0.953679 
 
 
-
 
NC_009719  Plav_0019  XRE family plasmid maintenance system antidote protein  41.25 
 
 
98 aa  63.2  0.000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191318  normal  0.0141037 
 
 
-
 
NC_010511  M446_6218  XRE family plasmid maintenance system antidote protein  43.48 
 
 
80 aa  63.5  0.000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.119122  normal 
 
 
-
 
NC_007643  Rru_A3068  plasmid maintenance system antidote protein  46.58 
 
 
95 aa  62.8  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.959159  n/a   
 
 
-
 
NC_007964  Nham_0579  XRE family plasmid maintenance system antidote protein  41.33 
 
 
101 aa  62.4  0.000000002  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1672  XRE family plasmid maintenance system antidote protein  43.04 
 
 
108 aa  62.8  0.000000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2491  XRE family plasmid maintenance system antidote protein  34.48 
 
 
96 aa  62.4  0.000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.289319  normal 
 
 
-
 
NC_009943  Dole_2889  XRE family plasmid maintenance system antidote protein  35.71 
 
 
104 aa  62.8  0.000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.955801  n/a   
 
 
-
 
NC_010814  Glov_0608  XRE family plasmid maintenance system antidote protein  46.38 
 
 
98 aa  62  0.000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1906  XRE family plasmid maintenance system antidote protein  35.9 
 
 
100 aa  62  0.000000003  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000136892  n/a   
 
 
-
 
NC_009483  Gura_3008  XRE family plasmid maintenance system antidote protein  38.46 
 
 
104 aa  61.2  0.000000004  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2829  XRE family plasmid maintenance system antidote protein  46.48 
 
 
110 aa  60.8  0.000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0896969  normal 
 
 
-
 
NC_011004  Rpal_2764  XRE family plasmid maintenance system antidote protein  46.48 
 
 
95 aa  60.8  0.000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.374165  n/a   
 
 
-
 
NC_010002  Daci_1211  XRE family plasmid maintenance system antidote protein  40.79 
 
 
103 aa  60.8  0.000000006  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_0214  virulence-associated protein, putative  40 
 
 
101 aa  60.5  0.000000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.756652  n/a   
 
 
-
 
NC_011060  Ppha_2031  XRE family plasmid maintenance system antidote protein  34.15 
 
 
106 aa  60.1  0.00000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.65469  n/a   
 
 
-
 
NC_010725  Mpop_1590  XRE family plasmid maintenance system antidote protein  36.67 
 
 
107 aa  60.1  0.00000001  Methylobacterium populi BJ001  Bacteria  normal  0.0352422  normal 
 
 
-
 
NC_008009  Acid345_3424  XRE family plasmid maintenance system antidote protein  36.78 
 
 
98 aa  59.7  0.00000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0947  XRE family plasmid maintenance system antidote protein  35.06 
 
 
106 aa  59.7  0.00000001  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4918  XRE family plasmid maintenance system antidote protein  36.49 
 
 
99 aa  59.3  0.00000002  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.128758 
 
 
-
 
NC_010725  Mpop_3935  XRE family plasmid maintenance system antidote protein  36.36 
 
 
123 aa  59.3  0.00000002  Methylobacterium populi BJ001  Bacteria  normal  normal  0.155055 
 
 
-
 
NC_009483  Gura_3818  XRE family plasmid maintenance system antidote protein  33.72 
 
 
94 aa  59.3  0.00000002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.00442118  n/a   
 
 
-
 
NC_013173  Dbac_2571  XRE family plasmid maintenance system antidote protein  33.7 
 
 
109 aa  58.9  0.00000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0403  XRE family plasmid maintenance system antidote protein  36.84 
 
 
99 aa  59.3  0.00000002  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1142  XRE family plasmid maintenance system antidote protein  36.84 
 
 
99 aa  59.3  0.00000002  Xylella fastidiosa M12  Bacteria  normal  0.570352  n/a   
 
 
-
 
NC_008255  CHU_0642  hypothetical protein  34.72 
 
 
96 aa  58.5  0.00000003  Cytophaga hutchinsonii ATCC 33406  Bacteria  decreased coverage  0.000000446232  normal  0.460246 
 
 
-
 
NC_011761  AFE_1754  virulence-associated protein, putative  42.11 
 
 
104 aa  58.2  0.00000004  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0614542  n/a   
 
 
-
 
NC_007643  Rru_A2019  plasmid maintenance system antidote protein  40 
 
 
99 aa  57.8  0.00000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0437  plasmid maintenance system antidote protein  29.89 
 
 
95 aa  57.4  0.00000006  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.494996  n/a   
 
 
-
 
NC_007514  Cag_1487  XRE family plasmid maintenance system antidote protein  33.77 
 
 
103 aa  57.4  0.00000006  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000000000645872  n/a   
 
 
-
 
NC_008639  Cpha266_1407  XRE family plasmid maintenance system antidote protein  32.61 
 
 
103 aa  57.4  0.00000007  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.117941  n/a   
 
 
-
 
NC_011206  Lferr_0091  XRE family plasmid maintenance system antidote protein  35.06 
 
 
105 aa  57.4  0.00000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011761  AFE_0089  DNA-binding protein, putative  35.06 
 
 
105 aa  57.4  0.00000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.993479  n/a   
 
 
-
 
NC_009675  Anae109_1543  XRE family plasmid maintenance system antidote protein  40.54 
 
 
118 aa  57  0.00000009  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.167279 
 
 
-
 
NC_007484  Noc_0417  XRE family transcriptional regulator  39.19 
 
 
104 aa  56.6  0.0000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_2693  plasmid maintenance system antidote protein, XRE family  39.19 
 
 
92 aa  56.6  0.0000001  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1377  XRE family plasmid maintenance system antidote protein  36.99 
 
 
99 aa  56.6  0.0000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_2505  XRE family plasmid maintenance system antidote protein  28.57 
 
 
103 aa  56.6  0.0000001  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000574166  normal 
 
 
-
 
NC_007964  Nham_2852  XRE family plasmid maintenance system antidote protein  33.33 
 
 
100 aa  56.2  0.0000001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3765  XRE family plasmid maintenance system antidote protein  28.74 
 
 
97 aa  56.6  0.0000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1455  XRE family plasmid maintenance system antidote protein  27.96 
 
 
100 aa  56.6  0.0000001  Desulfovibrio vulgaris DP4  Bacteria  normal  0.077029  normal 
 
 
-
 
NC_009485  BBta_0902  hypothetical protein  37.66 
 
 
199 aa  56.6  0.0000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_1480  XRE family plasmid maintenance system antidote protein  33.33 
 
 
102 aa  56.6  0.0000001  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0221448  n/a   
 
 
-
 
NC_010338  Caul_3225  XRE family plasmid maintenance system antidote protein  39.47 
 
 
106 aa  56.2  0.0000001  Caulobacter sp. K31  Bacteria  normal  normal  0.114466 
 
 
-
 
NC_011060  Ppha_2447  XRE family plasmid maintenance system antidote protein  34.67 
 
 
128 aa  55.8  0.0000002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.56382  n/a   
 
 
-
 
NC_010577  XfasM23_1425  XRE family plasmid maintenance system antidote protein  40 
 
 
99 aa  55.8  0.0000002  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0750  XRE family plasmid maintenance system antidote protein  33.78 
 
 
117 aa  55.8  0.0000002  Jonesia denitrificans DSM 20603  Bacteria  normal  0.236771  normal 
 
 
-
 
NC_010501  PputW619_4087  XRE family plasmid maintenance system antidote protein  38.37 
 
 
99 aa  55.8  0.0000002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5479  XRE family plasmid maintenance system antidote protein  34.29 
 
 
99 aa  54.7  0.0000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4148  XRE family plasmid maintenance system antidote protein  34.41 
 
 
101 aa  54.3  0.0000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.287171  normal 
 
 
-
 
NC_013889  TK90_1633  plasmid maintenance system antidote protein, XRE family  28.74 
 
 
105 aa  54.3  0.0000005  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0899701  normal  0.785699 
 
 
-
 
NC_013037  Dfer_4500  XRE family plasmid maintenance system antidote protein  27.59 
 
 
99 aa  54.3  0.0000006  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.550402 
 
 
-
 
NC_010803  Clim_1368  XRE family plasmid maintenance system antidote protein  35.37 
 
 
102 aa  54.3  0.0000006  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3127  plasmid maintenance system antidote protein, XRE family  34.34 
 
 
131 aa  53.9  0.0000007  Escherichia coli DH1  Bacteria  normal  0.273977  n/a   
 
 
-
 
NC_011353  ECH74115_0576  addiction module antidote protein, HigA family  34.34 
 
 
131 aa  53.9  0.0000007  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0560  addiction module antidote protein  34.34 
 
 
131 aa  53.9  0.0000007  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3133  XRE family plasmid maintenance system antidote protein  34.34 
 
 
131 aa  53.9  0.0000007  Escherichia coli ATCC 8739  Bacteria  normal  0.0484556  unclonable  0.0000000122724 
 
 
-
 
CP001509  ECD_00434  predicted DNA-binding transcriptional regulator  34.34 
 
 
113 aa  53.9  0.0000008  Escherichia coli BL21(DE3)  Bacteria  normal  0.449816  n/a   
 
 
-
 
NC_007484  Noc_1291  XRE family transcriptional regulator  33.72 
 
 
98 aa  53.9  0.0000008  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00439  hypothetical protein  34.34 
 
 
113 aa  53.9  0.0000008  Escherichia coli BL21  Bacteria  normal  0.540311  n/a   
 
 
-
 
NC_013441  Gbro_2894  addiction module antidote protein, HigA family  39.19 
 
 
119 aa  53.5  0.0000009  Gordonia bronchialis DSM 43247  Bacteria  normal  0.285023  n/a   
 
 
-
 
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