Gene AFE_1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1754 
Symbol 
ID7135396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1518552 
End bp1518866 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content57% 
IMG OID643530134 
Productvirulence-associated protein, putative 
Protein accessionYP_002426173 
Protein GI218667750 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0614542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGAATT TGCGCGCAGG TCGGTCTGTC CCCATTCACC CCGGCGAAAT CTTGCTGGAA 
GATTTTCTGA AGCCGATGGG TATCACCCAG TACCGTCTAG CCAAGGAACT CTGCGTCCCG
CAGCTCCGTA TCGGGGAGAT CGTGATAGGA AAGCGGGCTG TTACCCCGGA TACCGGGCTG
CGGCTGTCCC AGTTTTTCGG GATGAGCGAC GATTTCTGGG TGGGCCTGCA AATCGATTAC
GACCTTGCCG TGACGCGCCA CGCCATGCAG GCAGTTCTCA ATAAGATTCA ACGATACGAC
GTTCATGCGG CGTAA
 
Protein sequence
MANLRAGRSV PIHPGEILLE DFLKPMGITQ YRLAKELCVP QLRIGEIVIG KRAVTPDTGL 
RLSQFFGMSD DFWVGLQIDY DLAVTRHAMQ AVLNKIQRYD VHAA