37 homologs were found in PanDaTox collection
for query gene Arth_2027 on replicon NC_008541
Organism: Arthrobacter sp. FB24



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008541  Arth_2027  PadR family transcriptional regulator  100 
 
 
122 aa  249  7e-66  Arthrobacter sp. FB24  Bacteria  normal  0.104841  n/a   
 
 
-
 
NC_011886  Achl_3245  transcriptional regulator, PadR-like family  50.7 
 
 
206 aa  128  3e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014151  Cfla_3465  transcriptional regulator, PadR-like family  38.73 
 
 
230 aa  70.1  0.00000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.236404 
 
 
-
 
NC_013510  Tcur_1748  transcriptional regulator, PadR-like family  31.37 
 
 
217 aa  61.2  0.000000005  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.00000246986  n/a   
 
 
-
 
NC_008699  Noca_4612  PadR family transcriptional regulator  29.75 
 
 
234 aa  58.9  0.00000002  Nocardioides sp. JS614  Bacteria  normal  0.415527  n/a   
 
 
-
 
NC_014165  Tbis_2278  PadR-like family transcriptional regulator  31.68 
 
 
203 aa  57.8  0.00000005  Thermobispora bispora DSM 43833  Bacteria  normal  0.0846058  normal  0.116293 
 
 
-
 
NC_012669  Bcav_4102  transcriptional regulator, PadR-like family  31.21 
 
 
277 aa  54.7  0.0000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.615501 
 
 
-
 
NC_013947  Snas_2108  transcriptional regulator, PadR-like family  62.5 
 
 
251 aa  53.9  0.0000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.48804 
 
 
-
 
NC_011886  Achl_2053  transcriptional regulator, PadR-like family  30.56 
 
 
180 aa  52.4  0.000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000846941 
 
 
-
 
NC_009077  Mjls_5239  PadR family transcriptional regulator  30.71 
 
 
213 aa  52.8  0.000002  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6747  transcriptional regulator protein-like protein  28.67 
 
 
250 aa  50.8  0.000007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.222506 
 
 
-
 
NC_008705  Mkms_4960  PadR family transcriptional regulator  30 
 
 
220 aa  50.8  0.000007  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4871  PadR family transcriptional regulator  30 
 
 
220 aa  50.8  0.000007  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4033  transcriptional regulator, PadR-like family  55 
 
 
255 aa  48.9  0.00002  Conexibacter woesei DSM 14684  Bacteria  normal  0.878781  normal 
 
 
-
 
NC_013510  Tcur_0796  transcriptional regulator, PadR-like family  32.95 
 
 
195 aa  48.5  0.00003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_00550  predicted transcriptional regulator  27.4 
 
 
271 aa  45.8  0.0002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.100515 
 
 
-
 
NC_013093  Amir_5903  transcriptional regulator, PadR-like family  28.57 
 
 
316 aa  45.4  0.0003  Actinosynnema mirum DSM 43827  Bacteria  normal  0.33122  n/a   
 
 
-
 
NC_014210  Ndas_3199  transcriptional regulator, PadR-like family  55 
 
 
277 aa  45.1  0.0003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.637642  normal 
 
 
-
 
NC_010505  Mrad2831_1577  PadR-like family transcriptional regulator  42.62 
 
 
210 aa  44.7  0.0004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.63756 
 
 
-
 
NC_009338  Mflv_1330  PadR-like family transcriptional regulator  28.57 
 
 
240 aa  44.7  0.0005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.855689  normal  0.544163 
 
 
-
 
NC_014158  Tpau_2305  transcriptional regulator, PadR-like family  50 
 
 
250 aa  44.3  0.0006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3441  PadR family transcriptional regulator  41.18 
 
 
204 aa  43.1  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.690369  n/a   
 
 
-
 
NC_009953  Sare_1309  PadR-like family transcriptional regulator  28.57 
 
 
189 aa  43.5  0.001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.123604 
 
 
-
 
NC_008726  Mvan_5462  PadR-like family transcriptional regulator  27.78 
 
 
249 aa  42.7  0.001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.802601 
 
 
-
 
NC_008148  Rxyl_0525  PadR family transcriptional regulator  44 
 
 
176 aa  43.1  0.001  Rubrobacter xylanophilus DSM 9941  Bacteria  hitchhiker  0.00520723  n/a   
 
 
-
 
NC_013124  Afer_1365  transcriptional regulator, PadR-like family  30.08 
 
 
183 aa  43.1  0.001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1695  transcriptional regulator, PadR-like family  41.27 
 
 
195 aa  42.4  0.002  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00000619842 
 
 
-
 
NC_011832  Mpal_1462  transcriptional regulator, PadR-like family  50 
 
 
238 aa  42.4  0.002  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_011832  Mpal_1237  transcriptional regulator, PadR-like family  46.34 
 
 
226 aa  42.4  0.002  Methanosphaerula palustris E1-9c  Archaea  normal  normal  0.0180596 
 
 
-
 
NC_009664  Krad_1033  transcriptional regulator, PadR-like family  54.29 
 
 
219 aa  42.7  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.333889 
 
 
-
 
NC_013131  Caci_5885  transcriptional regulator, PadR-like family  55.26 
 
 
334 aa  42  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2852  transcriptional regulator, PadR-like family  45.1 
 
 
191 aa  41.6  0.004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.118488  normal 
 
 
-
 
NC_010465  YPK_0961  PadR-like family transcriptional regulator  48.78 
 
 
226 aa  41.6  0.004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3876  PadR family transcriptional regulator  48.78 
 
 
226 aa  41.6  0.004  Yersinia pestis Angola  Bacteria  normal  0.483976  normal  0.0238497 
 
 
-
 
NC_009708  YpsIP31758_0905  PadR family transcriptional regulator  48.78 
 
 
226 aa  41.6  0.004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.760063  n/a   
 
 
-
 
NC_009720  Xaut_0164  PadR-like family transcriptional regulator  48.78 
 
 
200 aa  40.8  0.006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.924623  normal 
 
 
-
 
NC_007925  RPC_3227  PadR-like family transcriptional regulator  46.34 
 
 
195 aa  40.4  0.008  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.381918  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>