Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1237 |
Symbol | |
ID | 7271515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | + |
Start bp | 1267785 |
End bp | 1268465 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643569872 |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_002466296 |
Protein GI | 219851864 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0180596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAC ACTATTTTAG AATGGATGAT GGCCGCGCCC AGAGAGAGCC TGGTTTTGCA GGACGCGAAG GTTTCAATTC AGGACCTCCC GAGAGGAATG AGGAGAGTTT CGGAGATAGA GAGCACCACA GTTTTGGTGG CCACGGGGAT TTCAGACCAG GGCCTCACGA GAGGTTTGAT CGAGGTTTTG GTGGCAGAGG GCATGGCGCC TTTGGTGGCG GGCGTGAACG TTTGTTCAAT TCAGGCGACT TCAAACTTGT CGTCCTCAAA CTGCTCTCTG AGCAGCCGAG TTACGGATAC CAACTCATCA AGACCATGGA GCAACGCCTT GCAGGCGGTT ACACCCCGAG CGCCGGCGTT ATTTATCCTA CCTTGACAAT GCTGGAGGAA GAGGGGCTTG CCATCGTATC TTCAGAGAAC AACAAGAAGA TCTATTCGGT GACCCCAGAA GGAGTCCAAT ACCTTCAGAC CAACGAAGGT CGAGTAACGG AGCTGTTCAA CCACCTCGAA GAGGCGGGAA GGCATTTCCA ACGCGGCCGG TCTCCTGAAC TCATGCAAGC CTTCCATAAC TTACGCGGCG CTGTAGCGGC ACGCGTGTCG CGCGAGAGCG TGACACCAGA ACAAATCAGC AAAATCACGG AAGCGATCAA TGCCGCTGCC AAGGCCATTG ACGAACTCTG A
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Protein sequence | MNEHYFRMDD GRAQREPGFA GREGFNSGPP ERNEESFGDR EHHSFGGHGD FRPGPHERFD RGFGGRGHGA FGGGRERLFN SGDFKLVVLK LLSEQPSYGY QLIKTMEQRL AGGYTPSAGV IYPTLTMLEE EGLAIVSSEN NKKIYSVTPE GVQYLQTNEG RVTELFNHLE EAGRHFQRGR SPELMQAFHN LRGAVAARVS RESVTPEQIS KITEAINAAA KAIDEL
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