Gene Mpal_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1237 
Symbol 
ID7271515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1267785 
End bp1268465 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID643569872 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_002466296 
Protein GI219851864 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0180596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC ACTATTTTAG AATGGATGAT GGCCGCGCCC AGAGAGAGCC TGGTTTTGCA 
GGACGCGAAG GTTTCAATTC AGGACCTCCC GAGAGGAATG AGGAGAGTTT CGGAGATAGA
GAGCACCACA GTTTTGGTGG CCACGGGGAT TTCAGACCAG GGCCTCACGA GAGGTTTGAT
CGAGGTTTTG GTGGCAGAGG GCATGGCGCC TTTGGTGGCG GGCGTGAACG TTTGTTCAAT
TCAGGCGACT TCAAACTTGT CGTCCTCAAA CTGCTCTCTG AGCAGCCGAG TTACGGATAC
CAACTCATCA AGACCATGGA GCAACGCCTT GCAGGCGGTT ACACCCCGAG CGCCGGCGTT
ATTTATCCTA CCTTGACAAT GCTGGAGGAA GAGGGGCTTG CCATCGTATC TTCAGAGAAC
AACAAGAAGA TCTATTCGGT GACCCCAGAA GGAGTCCAAT ACCTTCAGAC CAACGAAGGT
CGAGTAACGG AGCTGTTCAA CCACCTCGAA GAGGCGGGAA GGCATTTCCA ACGCGGCCGG
TCTCCTGAAC TCATGCAAGC CTTCCATAAC TTACGCGGCG CTGTAGCGGC ACGCGTGTCG
CGCGAGAGCG TGACACCAGA ACAAATCAGC AAAATCACGG AAGCGATCAA TGCCGCTGCC
AAGGCCATTG ACGAACTCTG A
 
Protein sequence
MNEHYFRMDD GRAQREPGFA GREGFNSGPP ERNEESFGDR EHHSFGGHGD FRPGPHERFD 
RGFGGRGHGA FGGGRERLFN SGDFKLVVLK LLSEQPSYGY QLIKTMEQRL AGGYTPSAGV
IYPTLTMLEE EGLAIVSSEN NKKIYSVTPE GVQYLQTNEG RVTELFNHLE EAGRHFQRGR
SPELMQAFHN LRGAVAARVS RESVTPEQIS KITEAINAAA KAIDEL