Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpal_1462 |
Symbol | |
ID | 7270067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosphaerula palustris E1-9c |
Kingdom | Archaea |
Replicon accession | NC_011832 |
Strand | - |
Start bp | 1511028 |
End bp | 1511744 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643570086 |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_002466508 |
Protein GI | 219852076 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGAAC ACAATTTCAA AATGGGTGAA AGTCACGCCC AGCGAGGACC CGGCTTTGAC GAAAACGAAG GTTTCAACCG AGGGCCTCAA GAGAGAGATG TGCAGGGTTT CTGTGACAGA GAGTACGGCA GCATTGGTAA CAGAGGGTGC CGTGGTTTCG GAGATAGAGA ACTTGGCGGC TTTAATGGCA GAGACCCACA CGGTTTTGGT GGCCATGGTG GTAGAGACCC CCGCGGTTTT GGTGGCTTTG GAGGTGGACG GGGACGTTTA TTCGATGCCG GCGACATCAA GCTTGCCATT CTCAACTTGC TCTCGGAACA GCCAAGTTAC GGATACCAGA TCATCAAGAC CATGGAGCAA CGCCTTGCCG GAGGTTACGC GCCAAGTCCC GGCGTGATTT ATCCAACCCT GACGATGCTT GAAGAAGAGG GGCTTGCCAC TGTATCTTTA GAGGGCAGTA AGAAGGTCTA TTCGGTAACC CCGGAAGGAA TGCAATATCT TCAGACACAC GAGGAACGTG TAAAGGAACT ATTTGAGCGT CTCGAAGAGG CGGGAAGGGG TTTCCAGCAC GGCAGATCTC CTGAACTAAT GAAAGCCTTC AAAAACCTGC ACGGCGCTGT GATGGCACGT CTGCTGCGTG GGAACGCGAC ACCGGAACAG ATCAGCACAA TCGCAGAAAC TATGAATGCC GCGGCGAGGA CTATCGATGA TCTCTGA
|
Protein sequence | MMEHNFKMGE SHAQRGPGFD ENEGFNRGPQ ERDVQGFCDR EYGSIGNRGC RGFGDRELGG FNGRDPHGFG GHGGRDPRGF GGFGGGRGRL FDAGDIKLAI LNLLSEQPSY GYQIIKTMEQ RLAGGYAPSP GVIYPTLTML EEEGLATVSL EGSKKVYSVT PEGMQYLQTH EERVKELFER LEEAGRGFQH GRSPELMKAF KNLHGAVMAR LLRGNATPEQ ISTIAETMNA AARTIDDL
|
| |