Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2108 |
Symbol | |
ID | 8883301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2234481 |
End bp | 2235236 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_003510895 |
Protein GI | 291299617 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.48804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGCG AACACTCGTG GAACAACCCC TGGGGCGCCG ACATGCGCGA AACCCTGCGC GGCATGCGCC GCTCCCACGC CGAGGGCGAC TCCTCGCACG GCCGAGGCCG TGGCCGGGGT CGTGGCCGGC ACCACTCACA TCACCGCGGC TATGGACCGC CCGGCATGGG CGGTCCATGG GGCGGGATGC CGCCCATGCC CCCGATGCCA CCGTTCCCGC CGGGTTTCGG CGGCGGCCGC GGCTTCGGGC ATCGAGGCCG CAAGGCCCGA CGGGGCGACG TCCGGGCGGC GATCCTGTCG CTGTTGGGCG AGGGCCCGAT GAACGGCTAC CAGGTGATGC AGGCCATCGC CGAACGCAGC CAGGGCGGCT GGCGCCCCAG CCCCGGCGCG GTCTACCCCG CGCTGCAACA GCTCACCGAC GAGGGACTGG TCCAGCCCAC CGGAGAGGGA CGCAAGACCT TGTTCGAGCT CACCGAGGCC GGAACGGCCT ACATCGCCGA GCACGCCGAC GAGGTGGAAG CCCCGTGGGA GGCGATGACC CCACAGATCG ACGATGACGT CGTCGAACTG ATGAACCTGG CCCAGCAGTC GGGAACCGCG CTGATGCAGG TGATCCAGTC GGCGGGCCCG GTCGGTCGCG CCAAGGCCAG GAAGCTGCTC GAGGACGGAC GGCGCGGGCT GTACCAGATC CTCGCCGAGG GCGAGCCCGA GCCCGAAGCC GCCGACGACG CGGACGAGGA ACCCACACAG GACTAA
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Protein sequence | MSREHSWNNP WGADMRETLR GMRRSHAEGD SSHGRGRGRG RGRHHSHHRG YGPPGMGGPW GGMPPMPPMP PFPPGFGGGR GFGHRGRKAR RGDVRAAILS LLGEGPMNGY QVMQAIAERS QGGWRPSPGA VYPALQQLTD EGLVQPTGEG RKTLFELTEA GTAYIAEHAD EVEAPWEAMT PQIDDDVVEL MNLAQQSGTA LMQVIQSAGP VGRAKARKLL EDGRRGLYQI LAEGEPEPEA ADDADEEPTQ D
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