Gene Snas_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2108 
Symbol 
ID8883301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2234481 
End bp2235236 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003510895 
Protein GI291299617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.48804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCG AACACTCGTG GAACAACCCC TGGGGCGCCG ACATGCGCGA AACCCTGCGC 
GGCATGCGCC GCTCCCACGC CGAGGGCGAC TCCTCGCACG GCCGAGGCCG TGGCCGGGGT
CGTGGCCGGC ACCACTCACA TCACCGCGGC TATGGACCGC CCGGCATGGG CGGTCCATGG
GGCGGGATGC CGCCCATGCC CCCGATGCCA CCGTTCCCGC CGGGTTTCGG CGGCGGCCGC
GGCTTCGGGC ATCGAGGCCG CAAGGCCCGA CGGGGCGACG TCCGGGCGGC GATCCTGTCG
CTGTTGGGCG AGGGCCCGAT GAACGGCTAC CAGGTGATGC AGGCCATCGC CGAACGCAGC
CAGGGCGGCT GGCGCCCCAG CCCCGGCGCG GTCTACCCCG CGCTGCAACA GCTCACCGAC
GAGGGACTGG TCCAGCCCAC CGGAGAGGGA CGCAAGACCT TGTTCGAGCT CACCGAGGCC
GGAACGGCCT ACATCGCCGA GCACGCCGAC GAGGTGGAAG CCCCGTGGGA GGCGATGACC
CCACAGATCG ACGATGACGT CGTCGAACTG ATGAACCTGG CCCAGCAGTC GGGAACCGCG
CTGATGCAGG TGATCCAGTC GGCGGGCCCG GTCGGTCGCG CCAAGGCCAG GAAGCTGCTC
GAGGACGGAC GGCGCGGGCT GTACCAGATC CTCGCCGAGG GCGAGCCCGA GCCCGAAGCC
GCCGACGACG CGGACGAGGA ACCCACACAG GACTAA
 
Protein sequence
MSREHSWNNP WGADMRETLR GMRRSHAEGD SSHGRGRGRG RGRHHSHHRG YGPPGMGGPW 
GGMPPMPPMP PFPPGFGGGR GFGHRGRKAR RGDVRAAILS LLGEGPMNGY QVMQAIAERS
QGGWRPSPGA VYPALQQLTD EGLVQPTGEG RKTLFELTEA GTAYIAEHAD EVEAPWEAMT
PQIDDDVVEL MNLAQQSGTA LMQVIQSAGP VGRAKARKLL EDGRRGLYQI LAEGEPEPEA
ADDADEEPTQ D