Gene Ndas_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3199 
Symbol 
ID9247056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3823634 
End bp3824467 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content78% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003681113 
Protein GI297562139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.637642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA TGGCGATTCC CGGCCCCTGG TCCTGGGAGG CGCGCGGACC GCGCCGTCCG 
CGCCTTCCCT GGAGCCGCCA GCCGGAGGAG GAACGGCACG GACACCCCGG GCACCCGGGC
CACCGCGGTC CGCGAGGCGG CGGACGGTTC GCATTCGGCC CGCCCGGCCC GCCTCCGCCC
CCCGAGCCTC CGATGGGGCC GGGACGGCCG CCCTGGGGAG GAGGGCCCTT CGGCCCCGAC
CACCCCTTCG GCGGGTTCGG CCCCGGCGGA TTCGGGCCGG GCGGGGGGTT CGGCCCGGGA
GGCGGCCCCG GCGGCCGACG CCGGGGCGGG CACCGCGCCA AGCGGGGCGA CGTGCGTACC
GGCATCCTGA TGCTGCTCGC GGAGGAGCCG CGCAGCGGCT ACGAGATCAT CCGCGAGGGC
CGCGAGCGCA GCGGCGGCAT GTGGCGGCCC AGCCCGGGCT CGGTCTACCC CATGCTCCAG
CAGTTGGAGG ACGAGGGCCT GGTCGTCCAG GAGGAGGGCG AGGGGCGCCG CCGCCCCTAC
CGGCTCACCG AGGAGGGCAT CGCCCACCTG GAGGAGCACG GCGCCGGGCT CACCCCGCCC
TGGGAGGCGG TCGCCGACGC CTACGCCGAC AGCCGGTCCC GGTACGAGGA GGTCGCGGCC
CTGGCCCACC AGCTCACCGC GGCCGCGGCG CAGGTCGCCC AGGCGGGCAG CGCCGACCAG
CTGGAGCGGG CCAAACGGCT CCTGGCCGAG ACCCGGCGCA ACCTCTACCT CATCCTCGCC
GAGGAGGAGG CGGCCGACGG CGCCTCCGCC GCGGAGGAGG ACGACGAGGA CTGA
 
Protein sequence
MSAMAIPGPW SWEARGPRRP RLPWSRQPEE ERHGHPGHPG HRGPRGGGRF AFGPPGPPPP 
PEPPMGPGRP PWGGGPFGPD HPFGGFGPGG FGPGGGFGPG GGPGGRRRGG HRAKRGDVRT
GILMLLAEEP RSGYEIIREG RERSGGMWRP SPGSVYPMLQ QLEDEGLVVQ EEGEGRRRPY
RLTEEGIAHL EEHGAGLTPP WEAVADAYAD SRSRYEEVAA LAHQLTAAAA QVAQAGSADQ
LERAKRLLAE TRRNLYLILA EEEAADGASA AEEDDED