Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0961 |
Symbol | |
ID | 6089327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1076168 |
End bp | 1076848 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596024 |
Product | PadR-like family transcriptional regulator |
Protein accession | YP_001719715 |
Protein GI | 170023210 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGTC ATTCAAAACA CGATCATCGT CATGGTGGTC ATCGCCATGA AGGACAGGGC CACTGCGGTG AAAAAATGCG TCGCGGTGGT CGCCATAATG TGATGGCAGA AGATGCAGAA TCGGCAAGAG GCGGCAAACA TGGGCGCGGG CGTGGCGGTA AAATGCATCG CCTGTTCGAA CATGGGGATT TACGCGTGGT ACTGCTGGCG CTACTGAATA AAACCCCCAG CCACGGCTAT GAGCTGATTA AGGCTATTGA AGAAGCGTCA TCAGGTCTAT ATGTGCCAAG CCCTGGGGTT ATCTATCCAA CACTGACACT GTTGGAAGAG CAGGATTTTG TCACCCCCGT AGCCACGGGT AATGGCCGCA AAAGTTACCA AATTACTGAC GCTGGGAAGT TTGAACTACA GAAAAACCAA GCTATGGTCG ATGTAATCTT TGCTCGTCTG GCGCAGGTAA ACCGTCACAA AGAGGGGAAT CTGGCTGAAG GTATTGCCGA TGCAATGCAC CGCTTACGCC ACATTCTACG TAGCAATATG ATGCGTGCGG ATCTCACGCC AGAACAAGTA GCGCGTATTA ATACGGCGCT ACTGGCTGCG GTAGACACCA TTGAAGAAGA GTTGCAACCG GTTGGGGTGC AACCTGCGGC AGTTGATGCC ACTGTACAGG AGAAAAACTG A
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Protein sequence | MFGHSKHDHR HGGHRHEGQG HCGEKMRRGG RHNVMAEDAE SARGGKHGRG RGGKMHRLFE HGDLRVVLLA LLNKTPSHGY ELIKAIEEAS SGLYVPSPGV IYPTLTLLEE QDFVTPVATG NGRKSYQITD AGKFELQKNQ AMVDVIFARL AQVNRHKEGN LAEGIADAMH RLRHILRSNM MRADLTPEQV ARINTALLAA VDTIEEELQP VGVQPAAVDA TVQEKN
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