More than 300 homologs were found in PanDaTox collection
for query gene RPD_3961 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_3961  phosphatidylethanolamine N-methyltransferase  100 
 
 
212 aa  431  1e-120  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4115  phosphatidylethanolamine N-methyltransferase  95.75 
 
 
212 aa  418  1e-116  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1497  Phosphatidylethanolamine N-methyltransferase  93.4 
 
 
212 aa  409  1e-113  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0988  phosphatidylethanolamine N-methyltransferase  91 
 
 
212 aa  399  9.999999999999999e-111  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.387372  decreased coverage  0.00000591406 
 
 
-
 
NC_007964  Nham_0696  phosphatidylethanolamine N-methyltransferase  86.26 
 
 
212 aa  383  1e-105  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_1882  phosphatidyl-N-methylethanolamine N-methyltransferase  86.54 
 
 
211 aa  375  1e-103  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0604  UbiE/COQ5 methyltransferase  83.49 
 
 
212 aa  372  1e-102  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.977459  normal 
 
 
-
 
NC_010511  M446_2685  phosphatidylethanolamine N-methyltransferase  64.59 
 
 
229 aa  280  9e-75  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.469648 
 
 
-
 
NC_011894  Mnod_4809  Methyltransferase type 11  63.94 
 
 
229 aa  277  1e-73  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.483616  n/a   
 
 
-
 
NC_010505  Mrad2831_0345  phosphatidylethanolamine N-methyltransferase  58.77 
 
 
228 aa  248  4e-65  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.935966  normal 
 
 
-
 
NC_007406  Nwi_0696  UbiE/COQ5 methyltransferase  57.42 
 
 
229 aa  247  8e-65  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.488377 
 
 
-
 
NC_009485  BBta_6211  phosphatidyl-N-methylethanolamine N-methyltransferase  56.94 
 
 
225 aa  244  8e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1939  Phosphatidylethanolamine N-methyltransferase  51.21 
 
 
220 aa  204  6e-52  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010581  Bind_3036  phosphatidylethanolamine N-methyltransferase  51.17 
 
 
229 aa  204  7e-52  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.133888  normal 
 
 
-
 
NC_010511  M446_5117  phosphatidylethanolamine N-methyltransferase  48.5 
 
 
217 aa  189  4e-47  Methylobacterium sp. 4-46  Bacteria  normal  0.013812  hitchhiker  0.00397391 
 
 
-
 
NC_007925  RPC_1444  phosphatidylethanolamine N-methyltransferase  45.97 
 
 
219 aa  186  2e-46  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.0474733  normal 
 
 
-
 
NC_011894  Mnod_6066  Methyltransferase type 11  48 
 
 
217 aa  183  1.0000000000000001e-45  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.451332  n/a   
 
 
-
 
NC_010172  Mext_4097  phosphatidylethanolamine N-methyltransferase  47.5 
 
 
218 aa  180  1e-44  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.116223 
 
 
-
 
NC_011757  Mchl_4465  Phosphatidylethanolamine N-methyltransferase  47.5 
 
 
218 aa  180  1e-44  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.174082  normal 
 
 
-
 
NC_009720  Xaut_0403  phosphatidylethanolamine N-methyltransferase  43.13 
 
 
214 aa  178  5.999999999999999e-44  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0306332  normal 
 
 
-
 
NC_010725  Mpop_4578  Phosphatidylethanolamine N-methyltransferase  47 
 
 
218 aa  177  8e-44  Methylobacterium populi BJ001  Bacteria  normal  0.30493  normal  0.829265 
 
 
-
 
NC_011004  Rpal_4492  Phosphatidylethanolamine N-methyltransferase  45.02 
 
 
218 aa  174  6e-43  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1620  phosphatidylethanolamine N-methyltransferase  45.02 
 
 
218 aa  174  6e-43  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1629  phosphatidylethanolamine N-methyltransferase  45.02 
 
 
218 aa  173  1.9999999999999998e-42  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.615509  normal  0.918656 
 
 
-
 
NC_010505  Mrad2831_5064  phosphatidylethanolamine N-methyltransferase  46.5 
 
 
217 aa  172  3.9999999999999995e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.152165 
 
 
-
 
NC_009719  Plav_2189  phosphatidylethanolamine N-methyltransferase  42.51 
 
 
229 aa  172  5e-42  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2440  phosphatidylethanolamine N-methyltransferase  42.86 
 
 
204 aa  171  5.999999999999999e-42  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.330514 
 
 
-
 
NC_002977  MCA3065  phosphatidylethanolamine N-methyltransferase  42.16 
 
 
216 aa  171  1e-41  Methylococcus capsulatus str. Bath  Bacteria  normal  0.627483  n/a   
 
 
-
 
NC_007493  RSP_0721  phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase  42.86 
 
 
204 aa  170  2e-41  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.635481  n/a   
 
 
-
 
NC_009049  Rsph17029_2376  phosphatidylethanolamine N-methyltransferase  42.86 
 
 
204 aa  170  2e-41  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.282292 
 
 
-
 
NC_011369  Rleg2_0843  Phosphatidylethanolamine N-methyltransferase  44 
 
 
217 aa  168  6e-41  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0964  Phosphatidylethanolamine N-methyltransferase  43 
 
 
217 aa  164  9e-40  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.417338  normal 
 
 
-
 
NC_008688  Pden_4690  phosphatidylethanolamine N-methyltransferase  39.41 
 
 
206 aa  164  9e-40  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.179715 
 
 
-
 
NC_008043  TM1040_3086  phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase  38.21 
 
 
213 aa  159  2e-38  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_2168  phosphatidylethanolamine N-methyltransferase  44.17 
 
 
237 aa  154  8e-37  Acidiphilium cryptum JF-5  Bacteria  normal  0.240799  n/a   
 
 
-
 
NC_011365  Gdia_0321  Phosphatidylethanolamine N-methyltransferase  40.2 
 
 
245 aa  144  1e-33  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.943946  normal  0.235665 
 
 
-
 
NC_009952  Dshi_2712  putative phosphatidylethanolamine N-methyltransferase  39.6 
 
 
226 aa  144  1e-33  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.870029  normal 
 
 
-
 
NC_013889  TK90_0730  Phosphatidylethanolamine N-methyltransferase  39.42 
 
 
207 aa  142  5e-33  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp2097  hypothetical protein  34.95 
 
 
207 aa  139  1.9999999999999998e-32  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007484  Noc_0914  phosphatidylethanolamine N-methyltransferase  38.94 
 
 
255 aa  140  1.9999999999999998e-32  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl2086  hypothetical protein  34.95 
 
 
207 aa  139  3.9999999999999997e-32  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1009  Methyltransferase type 11  38.46 
 
 
218 aa  138  6e-32  Thioalkalivibrio sp. HL-EbGR7  Bacteria  hitchhiker  0.00745554  n/a   
 
 
-
 
NC_008789  Hhal_0826  methyltransferase type 11  37.98 
 
 
224 aa  137  1e-31  Halorhodospira halophila SL1  Bacteria  normal  0.457177  n/a   
 
 
-
 
NC_008340  Mlg_0492  phosphatidyl-N-methylethanolamine N-methyltransferase / phosphatidylethanolamine N-methyltransferase  40.7 
 
 
232 aa  133  1.9999999999999998e-30  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.578084 
 
 
-
 
NC_008699  Noca_2195  phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase  39.62 
 
 
213 aa  102  3e-21  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0008  phosphatidyl-N-methylethanolamine N-methyltransferase / phosphatidylethanolamine N-methyltransferase  37.41 
 
 
199 aa  99.8  3e-20  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.257422  normal  0.214675 
 
 
-
 
NC_008726  Mvan_2948  methyltransferase type 11  37.5 
 
 
212 aa  94.4  1e-18  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.160502  normal  0.130465 
 
 
-
 
NC_007298  Daro_3485  phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase  30.88 
 
 
197 aa  92.4  4e-18  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.171708 
 
 
-
 
NC_008699  Noca_3328  phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase  37.57 
 
 
210 aa  87.4  1e-16  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_2160  methyltransferase type 11  33.76 
 
 
236 aa  83.6  0.000000000000002  Acidovorax sp. JS42  Bacteria  normal  0.264842  normal  0.115714 
 
 
-
 
NC_011901  Tgr7_2723  Methyltransferase type 11  31.75 
 
 
200 aa  82  0.000000000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_2739  phosphatidylethanolamine N-methyltransferase, putative  30.86 
 
 
201 aa  80.1  0.00000000000002  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3689  Methyltransferase type 11  40 
 
 
195 aa  80.5  0.00000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.342023 
 
 
-
 
NC_011206  Lferr_2360  Methyltransferase type 11  30.86 
 
 
201 aa  80.1  0.00000000000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.175254  hitchhiker  0.000000000902529 
 
 
-
 
NC_011146  Gbem_3170  Methyltransferase type 11  31.31 
 
 
237 aa  80.1  0.00000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0018  phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase  37.06 
 
 
204 aa  78.2  0.00000000000009  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000241496  hitchhiker  0.00000138707 
 
 
-
 
NC_002977  MCA1441  UbiE/COQ5 family methlytransferase  37.84 
 
 
208 aa  77.8  0.0000000000001  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.000764793  n/a   
 
 
-
 
NC_013501  Rmar_1381  Methyltransferase type 11  36.25 
 
 
225 aa  77.4  0.0000000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.231177  n/a   
 
 
-
 
NC_011729  PCC7424_0288  Methyltransferase type 11  26.55 
 
 
215 aa  76.3  0.0000000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013422  Hneap_1280  Methyltransferase type 11  29.52 
 
 
204 aa  75.1  0.0000000000006  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_1709  Methyltransferase type 11  34.85 
 
 
206 aa  74.7  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.775489  normal  0.171516 
 
 
-
 
NC_013922  Nmag_1015  Methyltransferase type 11  30.29 
 
 
213 aa  73.6  0.000000000002  Natrialba magadii ATCC 43099  Archaea  normal  0.371605  n/a   
 
 
-
 
NC_007963  Csal_2810  phosphatidyl-N-methylethanolamine N-methyltransferase / phosphatidylethanolamine N-methyltransferase  32.92 
 
 
205 aa  72.4  0.000000000004  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2262  Methyltransferase type 11  33.61 
 
 
272 aa  71.2  0.00000000001  Cyanothece sp. PCC 7425  Bacteria  hitchhiker  0.0068662  normal 
 
 
-
 
NC_009635  Maeo_0509  methyltransferase type 11  34.29 
 
 
210 aa  70.5  0.00000000002  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013440  Hoch_4343  Methyltransferase type 11  33.1 
 
 
415 aa  70.1  0.00000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  0.414925  normal  0.473204 
 
 
-
 
NC_011729  PCC7424_2834  Methyltransferase type 11  27.13 
 
 
203 aa  69.7  0.00000000003  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0713675 
 
 
-
 
NC_013440  Hoch_5715  ubiquinone/menaquinone biosynthesis methyltransferase  31.95 
 
 
269 aa  69.3  0.00000000004  Haliangium ochraceum DSM 14365  Bacteria  normal  0.991449  normal 
 
 
-
 
NC_013235  Namu_2368  Methyltransferase type 11  33.13 
 
 
239 aa  69.3  0.00000000004  Nakamurella multipartita DSM 44233  Bacteria  decreased coverage  0.0000109502  hitchhiker  0.000328016 
 
 
-
 
NC_009719  Plav_0820  methyltransferase type 11  35.37 
 
 
226 aa  69.3  0.00000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191685  normal  0.813143 
 
 
-
 
NC_009719  Plav_2526  methyltransferase type 11  34.19 
 
 
205 aa  68.9  0.00000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0981998 
 
 
-
 
NC_009712  Mboo_1663  methyltransferase type 11  29.66 
 
 
243 aa  67.8  0.0000000001  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.639645  normal  0.0934074 
 
 
-
 
NC_007614  Nmul_A0349  UbiE/COQ5 methyltransferase  27.78 
 
 
199 aa  68.2  0.0000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_5332  Methyltransferase type 11  31.76 
 
 
199 aa  67.8  0.0000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013132  Cpin_7094  ubiquinone/menaquinone biosynthesis methyltransferase  30.23 
 
 
244 aa  67.4  0.0000000001  Chitinophaga pinensis DSM 2588  Bacteria  hitchhiker  0.0000000661752  normal 
 
 
-
 
NC_013440  Hoch_2840  MCP methyltransferase, CheR-type  37.23 
 
 
207 aa  68.2  0.0000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.698056  normal  0.8759 
 
 
-
 
NC_009483  Gura_2444  methyltransferase type 11  35.25 
 
 
280 aa  66.6  0.0000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013923  Nmag_3735  Methyltransferase type 11  32.95 
 
 
245 aa  67  0.0000000002  Natrialba magadii ATCC 43099  Archaea  normal  0.286886  n/a   
 
 
-
 
NC_010424  Daud_1087  ubiquinone/menaquinone biosynthesis methyltransferase  38.46 
 
 
248 aa  67  0.0000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0234174  n/a   
 
 
-
 
NC_010338  Caul_1854  methyltransferase type 11  41.9 
 
 
207 aa  67.4  0.0000000002  Caulobacter sp. K31  Bacteria  normal  normal  0.823258 
 
 
-
 
NC_013525  Tter_0503  ubiquinone/menaquinone biosynthesis methyltransferase  32.64 
 
 
242 aa  67  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_2332  ubiquinone/menaquinone biosynthesis methyltransferase  32.19 
 
 
245 aa  66.2  0.0000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_013158  Huta_1565  Methyltransferase type 11  30.46 
 
 
209 aa  66.6  0.0000000003  Halorhabdus utahensis DSM 12940  Archaea  normal  0.0848447  n/a   
 
 
-
 
NC_008025  Dgeo_0058  ubiquinone/menaquinone biosynthesis methyltransferases  33.74 
 
 
239 aa  66.2  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5685  Methyltransferase type 11  33.64 
 
 
204 aa  65.9  0.0000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5725  Methyltransferase type 11  33.64 
 
 
204 aa  65.9  0.0000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_1232  methyltransferase type 11  32.39 
 
 
238 aa  65.1  0.0000000007  Methanoculleus marisnigri JR1  Archaea  normal  0.976917  n/a   
 
 
-
 
NC_013093  Amir_3630  Methyltransferase type 11  34.69 
 
 
291 aa  65.1  0.0000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2198  ubiquinone/menaquinone biosynthesis methyltransferase  31.76 
 
 
238 aa  64.7  0.0000000009  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_2107  methyltransferase type 11  40.95 
 
 
273 aa  64.7  0.0000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2101  ArsR family transcriptional regulator  32.32 
 
 
317 aa  64.7  0.0000000009  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1610  Methyltransferase type 11  37.07 
 
 
225 aa  64.3  0.000000001  Ammonifex degensii KC4  Bacteria  normal  0.0535703  n/a   
 
 
-
 
NC_013037  Dfer_4023  ubiquinone/menaquinone biosynthesis methyltransferase  27.12 
 
 
240 aa  63.9  0.000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.712508 
 
 
-
 
NC_007604  Synpcc7942_1408  membrane-associated protein  32.62 
 
 
213 aa  63.9  0.000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_0208  UbiE/COQ5 methyltransferase  34.4 
 
 
250 aa  63.9  0.000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.0448386  normal 
 
 
-
 
NC_007796  Mhun_0217  UbiE/COQ5 methyltransferase  32.67 
 
 
255 aa  64.3  0.000000001  Methanospirillum hungatei JF-1  Archaea  normal  0.0805678  normal  0.734054 
 
 
-
 
NC_012850  Rleg_2874  Methyltransferase type 11  34.75 
 
 
224 aa  64.3  0.000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0919365  normal 
 
 
-
 
NC_013440  Hoch_5837  Methyltransferase type 11  38.4 
 
 
206 aa  64.7  0.000000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.735155  normal 
 
 
-
 
NC_013743  Htur_2404  Methyltransferase type 11  30.22 
 
 
226 aa  63.9  0.000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_002967  TDE0258  UbiE/COQ5 family methlytransferase  33.03 
 
 
250 aa  63.9  0.000000002  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
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