Gene Synpcc7942_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1408 
Symbol 
ID3774121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1459914 
End bp1460555 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID637799840 
Productmembrane-associated protein 
Protein accessionYP_400425 
Protein GI81300217 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGATGG AAAATCATTC CACCCCAGTT CAAGAAGAAT ATACAATCCT TGCATCATCC 
TACGATCGCC GCTGGGATTT TTATATTCAT GCCACTATTC AAGAAACCCT TAAGCGAATT
ACTATCAGCT CTCAAGCATC AGTCTTAGAC CTTGGTTGTG GAACTGGATC ACTCCTTCAA
CAACTTGCAG CACAATATCC TACAGTCAAG CTTTCAGGTT TAGATATATC AGCTGCAATG
CTAGCGATCG CTCGGCAGAA ACTACCGGAT TCAGTCAAGC TGCAGACTGG AGAAGCTAAT
GAACTCCCCT TTCCGGAACA CCATTTCGAC CTCGTGATCT CAACGAGTGT TTTCCATTAT
TTTCAAAACC CTGAAAAAGT TCTTCAAGAG ATCACGAGAG TTTTAAAGCC CCAGGGTTGC
TTGATTTTAA CGGACTGGTG CCGAAATTAC TTGATGATTA ACCTCCTAGA TCGATGGTTG
CATTGGGTTG ACAAGGCTCA TGTTAGAGCT TACTCAATAG ATGATTTGCA AAAGATATTA
ATCGAAAGCA ACTTTAAACT GCTATCAATT GACCAATATC GGATCAATTG GTTTTGGGGA
TTGATGACAA TACAGGCAGC TAGAGGTGAT ATAGCAGCCT AA
 
Protein sequence
MTMENHSTPV QEEYTILASS YDRRWDFYIH ATIQETLKRI TISSQASVLD LGCGTGSLLQ 
QLAAQYPTVK LSGLDISAAM LAIARQKLPD SVKLQTGEAN ELPFPEHHFD LVISTSVFHY
FQNPEKVLQE ITRVLKPQGC LILTDWCRNY LMINLLDRWL HWVDKAHVRA YSIDDLQKIL
IESNFKLLSI DQYRINWFWG LMTIQAARGD IAA