| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3170 |
|---|
| Symbol | |
|---|
| ID | 6780029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter bemidjiensis Bem |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011146 |
|---|
| Strand | - |
|---|
| Start bp | 3652480 |
|---|
| End bp | 3653193 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642769166 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_002139967 |
|---|
| Protein GI | 197119540 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCT CATGCTGTAG TGTTTTCTGT TGCAGTGGCA CGGTATCCCC CTATGCCAAA
GGGATGCTCG ACGCAAGGAT TTCCCAGGAC CAAATCGGAA GCGTGTACGA CAGGCTGTCG
AGCATCTACG ACATTTGGGG GAATCTTGCC GAGTCACGTG CCAGGCATCG GGCGATTGAG
CTTGCCGAGA TCGAAGATGG CCAAAGAATT GTGGAGGTAG CGGTAGGGAC GGGACTTGCT
TTTAACGAGA TCGTGAAGCG AAACCCAAAC GGCCGCAACA CCGGAATCGA TCTGTCCGCC
GGCATGCTGG AGAAGGCGAA GAACCGCTTG AAGAAGCTCT CAGGCGTCCA TTACGACCTC
ACTATCGGCA CTGCGTTCGA CCTTCCTGTA GAAACGGGGT GCGCAGACTT GCTCGTCAAC
AATTACATGT TCGACCTGAT TCCTTACGAT GACATGGATA GAGTACTGGC AGAGTTCCGG
CGTGTTCTCA AAAGCGGCGG CAGGCTCATC CTGGTCAACA TGACGGTCGG CGAGAGTCTG
CCCAGCCGGC TCTACGACTT CGTTTACCGG CTATCTCCCA AAACCATGGG AGGGTGCCGC
GGGGTGCGGC TGGCCGACAA GCTGAAACAG CACGGTTTCA CGGTCGAGGT GAGGGAGTAC
CATCAGCAGA TGCTATTTCC TTCCGAGGTG ATCCTGGCTC ATAAAGCGCG GTGA
|
|---|
| Protein sequence | MKLSCCSVFC CSGTVSPYAK GMLDARISQD QIGSVYDRLS SIYDIWGNLA ESRARHRAIE
LAEIEDGQRI VEVAVGTGLA FNEIVKRNPN GRNTGIDLSA GMLEKAKNRL KKLSGVHYDL
TIGTAFDLPV ETGCADLLVN NYMFDLIPYD DMDRVLAEFR RVLKSGGRLI LVNMTVGESL
PSRLYDFVYR LSPKTMGGCR GVRLADKLKQ HGFTVEVREY HQQMLFPSEV ILAHKAR
|
|---|
| |