Gene RPB_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_1620 
Symbol 
ID3909897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp1825900 
End bp1826556 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID637883515 
Productphosphatidylethanolamine N-methyltransferase 
Protein accessionYP_485240 
Protein GI86748744 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTG ATCTCGACAA ATCCCTGGTT GAAACCGCCT ACGCCCGCTG GGCGCCGATC 
TACGACGCGG TATGCGGGCC GGTGATGGTC AAGGGGCGTC GGGCGGCGGC CGCCGAGGCG
CGCGCGCAGG GCGGCAAGAT CCTCGAAGTC GGCGTCGGCA CCGGGCTGTC GTTCGACGAT
TACGACGCCT CGACCGAGAT TACCGGGATC GATCTCAGCA CGCCGATGCT GGAAAAGGCC
CGCGCCAAGA TGGCGACCGG TCGCTATCCG TGGGTCAAGG ACGTGCGCCG GATGGACGCG
CACGCCATGG AGTTCGCCGA CGCGACCTTC GACTGCGTCG TGGCGCAGTT CGTGATCACG
CTGGTCGAAA ACCCCGAACA GGTGCTGTCG GAGTGCCACC GCGTGGTCAA GCCGGGCGGC
CGTATCATCC TGGTCAATCA TTTGTATTCG GAAGTTGGCG TCGCCGCCGC GGTCGAGCGC
TGGGCGGCGC AGAAGACGCG CGGATTGGGG CTGCGCCCCG AGTTTCCATT CGCGCGGCTG
CAGGCCTGGG CGCAGGCCAA CAGCGACGCG ATCCTGGTCG AGCGGCGCAA GATCAAGCCG
TTCGGTATCT ACACGCTGGT GTGCTTCGAA CGAGCCGGCC CCTCGCTGGC GGCGTGA
 
Protein sequence
MTPDLDKSLV ETAYARWAPI YDAVCGPVMV KGRRAAAAEA RAQGGKILEV GVGTGLSFDD 
YDASTEITGI DLSTPMLEKA RAKMATGRYP WVKDVRRMDA HAMEFADATF DCVVAQFVIT
LVENPEQVLS ECHRVVKPGG RIILVNHLYS EVGVAAAVER WAAQKTRGLG LRPEFPFARL
QAWAQANSDA ILVERRKIKP FGIYTLVCFE RAGPSLAA