Gene TM1040_3086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3086 
Symbol 
ID4075532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp53571 
End bp54212 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content59% 
IMG OID638004587 
Productphosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase 
Protein accessionYP_611322 
Protein GI99078064 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAA AGGACATTGA AGTGAAAATT GAAGCGGTCG AGTCGTCCTA TGCCCGATGG 
GCGCCGGTTT ATGATCGAAC CTTTGGGGCT GTAACCGATG TCGGGCGCCG CAGGGCTGTG
TCCTTCATAA ACAATCGCAA AGGTCATGTG CTTGAGGTGG GCGTGGGAAC GGGCTTGTCG
CTGCCGCATT ACGGTCCAGA CGTCCGCGTC ACGGGCGTGG ATTTCAGCGC CGAGATGCTC
GCCAAGGCAC AGCGCAAGGT GGATGCACTC GATCTGGATG GCCGCGTTGA CCTGCAGCGC
ATGGACGCGC GCGAGCTGGC CTTTGAAAAC GCCACTTTCG ACACCATCGC CGCCATGCAT
GTGCTCTCGG TCGTTCCTGA GCCCGAACGC GTCATGGCCG AGATTGCGCG GGTTCTGAAG
CCCGGCGGCA AGGTGGTCAT CACCAACCAT TTTGCCAAGG ACACCGGCGT TCTTGCAGGG
CTTGAGCGTG TCGCCGCACC GATGGCGAAC CTGATCGGCT GGCACTCCGA TTTCAAGATG
GACACTATTT TGCAAGAACC CTCCTTGCAG GTGGCAGAAC TGCGCAAGCT GCCGCCGCTT
GGGATGATGA CCTTTTTGGT TCTTGAAAAG CGCGTCAACT GA
 
Protein sequence
MTGKDIEVKI EAVESSYARW APVYDRTFGA VTDVGRRRAV SFINNRKGHV LEVGVGTGLS 
LPHYGPDVRV TGVDFSAEML AKAQRKVDAL DLDGRVDLQR MDARELAFEN ATFDTIAAMH
VLSVVPEPER VMAEIARVLK PGGKVVITNH FAKDTGVLAG LERVAAPMAN LIGWHSDFKM
DTILQEPSLQ VAELRKLPPL GMMTFLVLEK RVN