Gene Cpin_7094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7094 
Symbol 
ID8363286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8872976 
End bp8873710 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content42% 
IMG OID644969227 
Productubiquinone/menaquinone biosynthesis methyltransferase 
Protein accessionYP_003126696 
Protein GI256426043 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000661752 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATA AGAAGATTGT ACCATTTGCC ACATCAGCAC TCAGCAAGAA GGAACAGGTA 
GCGACCATGT TCAACGACAT CGCACACCGC TATGACTTTC TTAACCATTT TATGTCTTTA
GGCATTGATA TTCAATGGCG TAAAAAGGCT TTAAAACAGC TGAAAACGTT ACAGCCCAAA
AAAATGCTGG ATGTGGCGAC AGGTACAGGG GACTTTGCCA TCATGGCCAA TAAAATGCTG
CGTCCCGATT CTATCATTGG TATTGATATT TCTGAGGGAA TGCTCTCCCA CGGCCGTGAG
AAGATCAATA AACTGGGTCT GAACGATAAA ATAACCCTTC AGCTGGGAGA CAGTGAGACA
ATAAGTTTTC CTGATCAGGC GTTTGATGCA ATAACGGTAG CATACGGTGT GCGCAACTTT
GAGCATCTGG AAAAGGGACT GTCAGAAATG TTGCGTGTAC TTAAACCGGG TGGAAAACTG
GTGATACTGG AATTTTCTAA TCCAACAGTT TTCCCTATTA AACAATTATA TAATTTATAT
TTTCGTTATA TTACACCTTT GATCGGAAAA TGGATCGCTA AGAGTCAGGC AGCATATACA
TATCTGCCGG AATCCGTGAA AGCGTTTCCA CAAGGTCAGG AAATGTGTAA TATTTTAACT
AATACCGGTT TCCAGGCAGT AACATGCAAA AAACTCACAT TCGGCATCAG CTCTATTTAT
TGCGCGTCCC GCTAG
 
Protein sequence
MSDKKIVPFA TSALSKKEQV ATMFNDIAHR YDFLNHFMSL GIDIQWRKKA LKQLKTLQPK 
KMLDVATGTG DFAIMANKML RPDSIIGIDI SEGMLSHGRE KINKLGLNDK ITLQLGDSET
ISFPDQAFDA ITVAYGVRNF EHLEKGLSEM LRVLKPGGKL VILEFSNPTV FPIKQLYNLY
FRYITPLIGK WIAKSQAAYT YLPESVKAFP QGQEMCNILT NTGFQAVTCK KLTFGISSIY
CASR