| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_2368 |
|---|
| Symbol | |
|---|
| ID | 8447979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 2610154 |
|---|
| End bp | 2610873 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645041488 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003201732 |
|---|
| Protein GI | 258652576 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0000109502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000328016 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CCGCGAACAC CCGGAGCCGG CGCTGGTTCG CCGCCTGGTA CCCGGCCTTC
ATGGGCCGCA TCGAGCGCAA CGGCCAGGCC ACACTGCGGC ACGACCAGCT CGCCACCGCC
GCCGGCCGGG CGCTCGAGAT CGGCGCCGGG AGCGGGCTTT CCGTCCCCCA CTACCCGGCC
GGACTCGACG AGCTGGTCCT GCTGGAGCCC AATCCCGCCT TCCGCACGCA GCTGCGCGAC
CGGGTCCGGG AGCTGCCGGT TACGGTGTCG ATCCTGGACG GCGACGCGCG GCAGCTGCCC
TTCCCGGATT CGACGTTCGA CACCGTGGCC GCGTCGTTGG TGTTCTGCTC GGTCGACGAT
CCGGACCGGG CGCTGCGGGA GGTGCACCGG GTGCTGCGGC CCGGCGGCCG GTTCCTGTTC
CACGAGCACG TCCGGGGTGG CCCGGTCCGC GGCGTGGTGC AAGACCTGCT GACTCCCCTG
CATCGCCGGC TGGCCGACGG CTGCCACGCC AACCGGGACT TCGAGGCGCT CCTGGACGCC
TCACCGCTGG CGGTGACCTC GATGGCCCAC CGGCGGATGC CCACCTCGCT GCCGACCCTG
GTGCCGCTGG TCGTCGGCAC GGCCGAGCGT CGCCCGGTCA CTGCGCCGGA ACGGACGGCT
CGGGTGGAAA CGGGCGGGCG CCTGCGTGAC AATCCAGTCC GTGGTGGCTC CCCACGCTGA
|
|---|
| Protein sequence | MTTTANTRSR RWFAAWYPAF MGRIERNGQA TLRHDQLATA AGRALEIGAG SGLSVPHYPA
GLDELVLLEP NPAFRTQLRD RVRELPVTVS ILDGDARQLP FPDSTFDTVA ASLVFCSVDD
PDRALREVHR VLRPGGRFLF HEHVRGGPVR GVVQDLLTPL HRRLADGCHA NRDFEALLDA
SPLAVTSMAH RRMPTSLPTL VPLVVGTAER RPVTAPERTA RVETGGRLRD NPVRGGSPR
|
|---|
| |