Gene Dfer_4023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4023 
Symbol 
ID8227620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4874854 
End bp4875576 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID644931866 
Productubiquinone/menaquinone biosynthesis methyltransferase 
Protein accessionYP_003088392 
Protein GI255037771 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID[TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.712508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAG TACCCTATAA AGACAAGGAA GGGACCAAGC GGGAGCAGGT TGCCGAGATG 
TTCGACAACA TTTCGCCAAA ATACGATCTG CTGAACCACA TCCTGAGTGG AGGTGTGGAT
ATTTACTGGC GCAAAAGGGC CATTAAATTG CTCAAAAAGC AGCAACCCAA AGTGATCCTT
GACATTGCGA CCGGCACGGG CGACTTTGCG ATCGAGGCGC TTGCGTTGAA ACCCGAAAAG
ATCATCGGCG TCGATATTTC CGAGGGAATG CTGGCGGTTG GCCGCGAAAA AATCGCTAAA
CTGGGCAAGC AGGATGTGAT TACGCTGCAA AGCGGCGACT CCGAAAGTTT GGCTTTCACA
GACAATTATT TTGACGCGAT TATCGTTTCG TTTGGAGTAC GCAATTTTCA GAATTTGCTG
GCCGGACTGA CAGAGATGAA CCGCGTGATG AAGCCAGGCG GAACTTGTGT GGTGGTCGAA
TTTTCGAAGC CCAAAAGCTT TCCATTCAAG CAGATTTATA ATTTTTATTT CAAATACATA
TTGCCGATAA TAGGAAAAAC GGTCTCCAAA GACAGCGCGG CGTATACATA TTTGCCCGAA
TCTGTGCAGG CCTTTCCGGA CGGGGAAGCT TTTCTGGATA TTTATAAAAA AGCCGGTTTC
ATTAATACCA AATGCATATC ACTTACCTTC GGGATCTGTT CAATTTACGT CGGACACAAG
TAA
 
Protein sequence
MSVVPYKDKE GTKREQVAEM FDNISPKYDL LNHILSGGVD IYWRKRAIKL LKKQQPKVIL 
DIATGTGDFA IEALALKPEK IIGVDISEGM LAVGREKIAK LGKQDVITLQ SGDSESLAFT
DNYFDAIIVS FGVRNFQNLL AGLTEMNRVM KPGGTCVVVE FSKPKSFPFK QIYNFYFKYI
LPIIGKTVSK DSAAYTYLPE SVQAFPDGEA FLDIYKKAGF INTKCISLTF GICSIYVGHK