Gene Pden_4690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_4690 
Symbol 
ID4583193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008688 
Strand
Start bp183281 
End bp183901 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content66% 
IMG OID639771994 
Productphosphatidylethanolamine N-methyltransferase 
Protein accessionYP_918447 
Protein GI119387413 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.179715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG AAGCCATCCA ATCCTCCTAT TCCCGCTGGG CACCGATCTA CGACCGGACC 
TTCGGGGCAG CGACCAGCAT CGGCCGGCGA CGGGCGGTGG ACCATATCAA CCGCCGCGGC
GGCACCGTGC TGGAGGTCGG CGTCGGCACC GGGCTGTCGC TGGAGCATTA CGGCCCGCAG
ATGCAGGTCA CCGGCATCGA TTTCAGCCAG GACATGCTGG ACAAGGCCAT CGCCAAGGTG
CAGCGCCTGG GCCTGAAGCA GGTGCATGAG CTGCGGCAGA TGGATGCGCG GGCACTGGAT
TTCCCGGACG ACCATTTCGA CACGGTGACG GCGATGCATG TGCTGTCGGT GGTGCCCGAA
CCCGAGCGGG TGATGGCCGA GATCGCCCGG GTCTGCAAGC CTGGCGGCAA GGTCGTCATC
ACCAACCATT TCGCGCGCGA GAGCGGCGCG ATGGCGGCGG TGGAGCGGGT TTTCGCGCCC
CTGGCCAACA CCATCGGCTG GCATTCCGAT TTCCGCATCG ACCGGGTGCT GGGGCAGGAA
TCGCTGGTGC TAGAGGAACG CCGGACCCTG CCGCCGCTGG GGATGATGAC CTTCCTGGTG
CTGGGCAAGG TCGCGGGCTG A
 
Protein sequence
MDIEAIQSSY SRWAPIYDRT FGAATSIGRR RAVDHINRRG GTVLEVGVGT GLSLEHYGPQ 
MQVTGIDFSQ DMLDKAIAKV QRLGLKQVHE LRQMDARALD FPDDHFDTVT AMHVLSVVPE
PERVMAEIAR VCKPGGKVVI TNHFARESGA MAAVERVFAP LANTIGWHSD FRIDRVLGQE
SLVLEERRTL PPLGMMTFLV LGKVAG