| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE0258 |
|---|
| Symbol | |
|---|
| ID | 2739683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 292222 |
|---|
| End bp | 292974 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637159131 |
|---|
| Product | UbiE/COQ5 family methlytransferase |
|---|
| Protein accession | NP_970873 |
|---|
| Protein GI | 42525775 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAA AAGATTTAAT GAAAAAATGG TCTGAACAGG CAGAAAATAT GCGGATGTTT
CACATGCAGG AATTAAAAGA AAACGGGAGT GAATGGAAAA AACTGCTTCA GGAAAATCTC
AAGGACTGCA AGGGAAAGAA AGTTTTGGAT GCAGGGTGCG GTACAGGTTT TTTAGCTATT
CTGCTTGCAC AAGACGGCTG GGAAGTTACA GCCATAGACA GCAGCGAGGC GATGCTTGAA
GAAGGAAAAA AAACAGCGGA AGAATTGGGG CTTTCTGACA AAATCACCTT TTTGCTTAAA
GATGCTCATT CAACGGATTT TCCTGAACAC TTATTTGATG CTGTGGTTTC CAGACATGCT
TCATGGCTAT TCACTGCACC GGAAACCGTA TACAAGGAAT GGAAAAGAAT ACTAAAGCCC
GGAGGGATCA TGCTGAACAT TGACGCTAAT TGGCTTAAAC CGATATGGAA TACAGATGAG
TTTGAAAAAT TCAAATCATA TGAAGCGGAG CTTGTTAAGC AATACGGCGA ATTCAGAGAT
TATTATCATG ATGAACAGAT GATAAACATT CTGAAAAAAT TTCCGCTTGC CTACATAAAT
CGTCCTGAAT GGGATGAAAA AATGCTGAAA AAAATCGATT TTAAAGAAAT TGCGAGCAGG
CTTCTTTCCA AAGAGAAGTA TATGGACGCT TTTCAAGCGG CAAGGTATAA AACCATACCT
ATGTTCGTGA TAAAAGCAAA AAACATAGAA TAA
|
|---|
| Protein sequence | MDIKDLMKKW SEQAENMRMF HMQELKENGS EWKKLLQENL KDCKGKKVLD AGCGTGFLAI
LLAQDGWEVT AIDSSEAMLE EGKKTAEELG LSDKITFLLK DAHSTDFPEH LFDAVVSRHA
SWLFTAPETV YKEWKRILKP GGIMLNIDAN WLKPIWNTDE FEKFKSYEAE LVKQYGEFRD
YYHDEQMINI LKKFPLAYIN RPEWDEKMLK KIDFKEIASR LLSKEKYMDA FQAARYKTIP
MFVIKAKNIE
|
|---|
| |