13 homologs were found in PanDaTox collection
for query gene VEA_000616 on replicon NC_013457
Organism: Vibrio sp. Ex25



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013457  VEA_000616  hypothetical protein  100 
 
 
345 aa  705    Vibrio sp. Ex25  Bacteria  normal  0.643039  n/a   
 
 
-
 
NC_011313  VSAL_II0688  hypothetical protein  42.24 
 
 
348 aa  282  6.000000000000001e-75  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0676  hypothetical protein  39.19 
 
 
347 aa  263  3e-69  Aliivibrio salmonicida LFI1238  Bacteria  decreased coverage  0.00398993  n/a   
 
 
-
 
NC_008700  Sama_0507  hypothetical protein  33.82 
 
 
349 aa  212  7.999999999999999e-54  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3534  hypothetical protein  32.66 
 
 
351 aa  200  3e-50  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0421  hypothetical protein  32.66 
 
 
351 aa  199  3.9999999999999996e-50  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0449  hypothetical protein  33.71 
 
 
351 aa  194  2e-48  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4178  hypothetical protein  31.23 
 
 
351 aa  188  2e-46  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_0165  Multidrug resistance efflux pump-like protein  24.32 
 
 
366 aa  72.4  0.000000000009  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0733  Multidrug resistance efflux pump-like protein  24.01 
 
 
356 aa  54.3  0.000003  Acidovorax ebreus TPSY  Bacteria  normal  0.403647  n/a   
 
 
-
 
NC_009483  Gura_1183  secretion protein HlyD family protein  28.52 
 
 
354 aa  51.6  0.00002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1375  secretion protein HlyD  25.64 
 
 
374 aa  44.3  0.003  Geobacter metallireducens GS-15  Bacteria  normal  0.0634631  hitchhiker  0.000428617 
 
 
-
 
NC_009767  Rcas_1765  secretion protein HlyD family protein  33.77 
 
 
541 aa  44.3  0.003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.186436  normal 
 
 
-
 
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