Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3534 |
Symbol | |
ID | 4254099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4222490 |
End bp | 4223545 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120171 |
Product | hypothetical protein |
Protein accession | YP_735656 |
Protein GI | 113971863 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAA ATTATCAACC GAGCGATAAA GCGCAGCGTC CAACGGATGA CAGCGGCATA GGGGTAAAAT ATGCCGCAGC TAAACGGGGC GGCTTTAAGG GGCGCTGGTA CTTGTTATTA GCCTTGGTGA TTACGCCCGT CGCTGTGGTC GGCTGGATAT TGCTGCGTCC CCATTTGTTT ATTTTGGCCA GTGGCATAGT GACGACCGAG CCCTTAGAAG TACGCGCCCC CAGTGCGGGG GATGTTGCCG CTGTCAAGGT GAAGCGGGGC GATGTGCTTG CCAGTGGAAC ACATATTCTG ACCTTAGTCG ATGCGCAGTT AGGGGCACAA ATCCATGAGT TAGAGAAGCA ATTGTCTCAG CTTGAACTCA ACAATCTCAG CCTTAATGCC GAAATCCTCA CGCAATTACA GCAGCGTATC GATGTGGCGG CTGAAGGGGT CACGCGGCAG AATGGGCTGC TCGACAGTTT TGAGCGTTAC CAGCGAAAAG GGGTTGTCCC CACTGCGGAT ATGGCGGCAG TGTTGCAGGC GCACACGGCT TCAAAGATGG CACTCGAACA GGCCAAAGTC GATTTAATGC AGGCGCGTCA AGCGCAGAAG ACCGAGTTGC TTGCGGGGCC TATTGCTCAA TCAAAATACA ATGTCGAGCT GCAGCTCGCC CGATTAAAAG CACAGGAATC GCAATTAGAT ATTAAGGCGC TTACCCCGAC TCGGGTCGTT GATGTATTAG TGCAAGCGGG TGAGCATATC GTCGAAGACA GGCCCTTAGT CTTACTCTCG GGTCGTGAGG CGGCGGTGAT CTTTGCCTAC CTTGAACCTA AGTACTTGGA ATATACCGCC ATAGGCCAAG AGGCGACCAT TAAATTACCC AATGGCACTC GGCTAAGGGG TGAGATTTCG GAACCAACCG AGTTAGTGGG GCGCTTGCCT AAGCAATTGT CGGGTCCATT CGATGGAGAA AAGCCCGTAT TGAAAATAAC CTTGAAGCCG GAAACTGCTT TGCCCACGTC GATTGAAGGC GTGCCGGTTG AAGTCAGTTT TGATTATCTT TGGTAG
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Protein sequence | MKVNYQPSDK AQRPTDDSGI GVKYAAAKRG GFKGRWYLLL ALVITPVAVV GWILLRPHLF ILASGIVTTE PLEVRAPSAG DVAAVKVKRG DVLASGTHIL TLVDAQLGAQ IHELEKQLSQ LELNNLSLNA EILTQLQQRI DVAAEGVTRQ NGLLDSFERY QRKGVVPTAD MAAVLQAHTA SKMALEQAKV DLMQARQAQK TELLAGPIAQ SKYNVELQLA RLKAQESQLD IKALTPTRVV DVLVQAGEHI VEDRPLVLLS GREAAVIFAY LEPKYLEYTA IGQEATIKLP NGTRLRGEIS EPTELVGRLP KQLSGPFDGE KPVLKITLKP ETALPTSIEG VPVEVSFDYL W
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