Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000616 |
Symbol | |
ID | 8558921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 713436 |
End bp | 714473 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646408280 |
Product | hypothetical protein |
Protein accession | YP_003287767 |
Protein GI | 262395914 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.643039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA ACTTTCACTT AGATAAGAAA AACAAGCCGC AGTCTGAGAA CGGGATGAAA GTCGTCTACG GACAGGCAAA GCGTGGCGGT TATCGTCTCC GTTGGTACTT GATTTTAGCG ATTGTAATCA GTCCGCTTTT GTTTATGGCT TATTATTTGT TTAGAACGCA AGTGTTAGTG ACGGCGCCTG CCATAATCAC GTCACATCCA CTTACGGTGA CGGCAACTCG CTCTGCCATT GTTGGGCCAG TGCCTGTGAA TGTCGGTACG GAAGTGACTC AGGATCAAGC GCTGCTGTTG TTAAAAGATA ACGCGTTGAA TAAAGAGATT GATTTCATTA AAGATGAGCT GGTGAAACTG TCTAAAAATC AGGTGCAAAG TACTGATGAG CTATACAAAA GTGCTATTGA AAGCTCAGCC GAAGGCTTGA AGAAGGTCCG TGATATTCAG AAAAAATACG ACCTTTACAG AAAGAAAGGG CAAGTGTCTG AGGTGGATTA CGCCGCTATT GTGAGTGTGA ATAACTCACT GAGTAATCAG TTAAGCAGTC AGAAAATTGC TTATGTGGAT GCGATGCGTA ACTTGGAAGA GTTAGAGTTG GCTGGTCCAG TGACACAAGA GTATCGTTCT TTAATGCGTG AGCTGGTAGT AAAGCGTGCT CAACAAGAAG ATCTCACCTT CCGTTCTCCT ATGGACGGTC GTGTACTCGA TATTCATGTG CATGAGGGGC AAAATGTATC GGAAAATACG CCATTGCTCA CGATTGCTCG CAACGTGACA CCTGAAATTA CGGCTTTTCT AAATCCTAAA TACCTCGAAT ACAGTAATAT GGAAACCAAA GCAAAAGTCG TATTTCCTGA TGGTCGAAAG TTTAGAGCGA CGGTATCGAA GCCAGTTGAG GTTGTGAACA AATTGCCTTC AGAACTTCAA AGCCCATTTG AAGGTCAGCC AGCCTATTTA AAAGTCACAC TGAGCTTTGA TGAGCCGTTG GAAAAAAGTC GATGGATTGA AGGGGTCGAA GTGGAAGTTC GCTTTTAA
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Protein sequence | MKVNFHLDKK NKPQSENGMK VVYGQAKRGG YRLRWYLILA IVISPLLFMA YYLFRTQVLV TAPAIITSHP LTVTATRSAI VGPVPVNVGT EVTQDQALLL LKDNALNKEI DFIKDELVKL SKNQVQSTDE LYKSAIESSA EGLKKVRDIQ KKYDLYRKKG QVSEVDYAAI VSVNNSLSNQ LSSQKIAYVD AMRNLEELEL AGPVTQEYRS LMRELVVKRA QQEDLTFRSP MDGRVLDIHV HEGQNVSENT PLLTIARNVT PEITAFLNPK YLEYSNMETK AKVVFPDGRK FRATVSKPVE VVNKLPSELQ SPFEGQPAYL KVTLSFDEPL EKSRWIEGVE VEVRF
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