Gene VEA_000616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000616 
Symbol 
ID8558921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp713436 
End bp714473 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content44% 
IMG OID646408280 
Producthypothetical protein 
Protein accessionYP_003287767 
Protein GI262395914 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.643039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA ACTTTCACTT AGATAAGAAA AACAAGCCGC AGTCTGAGAA CGGGATGAAA 
GTCGTCTACG GACAGGCAAA GCGTGGCGGT TATCGTCTCC GTTGGTACTT GATTTTAGCG
ATTGTAATCA GTCCGCTTTT GTTTATGGCT TATTATTTGT TTAGAACGCA AGTGTTAGTG
ACGGCGCCTG CCATAATCAC GTCACATCCA CTTACGGTGA CGGCAACTCG CTCTGCCATT
GTTGGGCCAG TGCCTGTGAA TGTCGGTACG GAAGTGACTC AGGATCAAGC GCTGCTGTTG
TTAAAAGATA ACGCGTTGAA TAAAGAGATT GATTTCATTA AAGATGAGCT GGTGAAACTG
TCTAAAAATC AGGTGCAAAG TACTGATGAG CTATACAAAA GTGCTATTGA AAGCTCAGCC
GAAGGCTTGA AGAAGGTCCG TGATATTCAG AAAAAATACG ACCTTTACAG AAAGAAAGGG
CAAGTGTCTG AGGTGGATTA CGCCGCTATT GTGAGTGTGA ATAACTCACT GAGTAATCAG
TTAAGCAGTC AGAAAATTGC TTATGTGGAT GCGATGCGTA ACTTGGAAGA GTTAGAGTTG
GCTGGTCCAG TGACACAAGA GTATCGTTCT TTAATGCGTG AGCTGGTAGT AAAGCGTGCT
CAACAAGAAG ATCTCACCTT CCGTTCTCCT ATGGACGGTC GTGTACTCGA TATTCATGTG
CATGAGGGGC AAAATGTATC GGAAAATACG CCATTGCTCA CGATTGCTCG CAACGTGACA
CCTGAAATTA CGGCTTTTCT AAATCCTAAA TACCTCGAAT ACAGTAATAT GGAAACCAAA
GCAAAAGTCG TATTTCCTGA TGGTCGAAAG TTTAGAGCGA CGGTATCGAA GCCAGTTGAG
GTTGTGAACA AATTGCCTTC AGAACTTCAA AGCCCATTTG AAGGTCAGCC AGCCTATTTA
AAAGTCACAC TGAGCTTTGA TGAGCCGTTG GAAAAAAGTC GATGGATTGA AGGGGTCGAA
GTGGAAGTTC GCTTTTAA
 
Protein sequence
MKVNFHLDKK NKPQSENGMK VVYGQAKRGG YRLRWYLILA IVISPLLFMA YYLFRTQVLV 
TAPAIITSHP LTVTATRSAI VGPVPVNVGT EVTQDQALLL LKDNALNKEI DFIKDELVKL
SKNQVQSTDE LYKSAIESSA EGLKKVRDIQ KKYDLYRKKG QVSEVDYAAI VSVNNSLSNQ
LSSQKIAYVD AMRNLEELEL AGPVTQEYRS LMRELVVKRA QQEDLTFRSP MDGRVLDIHV
HEGQNVSENT PLLTIARNVT PEITAFLNPK YLEYSNMETK AKVVFPDGRK FRATVSKPVE
VVNKLPSELQ SPFEGQPAYL KVTLSFDEPL EKSRWIEGVE VEVRF