Gene Taci_0165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTaci_0165 
Symbol 
ID8629975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermanaerovibrio acidaminovorans DSM 6589 
KingdomBacteria 
Replicon accessionNC_013522 
Strand
Start bp184140 
End bp185240 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content69% 
IMG OID 
ProductMultidrug resistance efflux pump-like protein 
Protein accessionYP_003316687 
Protein GI269791783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGATCC GTTTCAGCCG TAAGGAGTCC CCCAACGTGG ACCCCGGGGG GTTAAAGGTG 
GACTACGGCC CCGCCAGGAG GGCAGCCCTG AAGTGGCGGT GGTACCTGTT GCTGTTGCTC
CTGTTCTCCC CCCTGGCCTT CTTGCTGTGG AAGGTGGCCA GCTACGCGAT CCTGGTCTCC
GCCCCCGGGG TGGTCAGGCT GGAGACGGTC ACCGTGTCCT CCCCCATCCA GGGGGTGGTG
TCCCTGCCCC TCAGGCCCGG GCAGCTGGTG AGGCGCGGGG ACCAACTCTT CTCCGTCCGG
GACCCGTCGG TGGAGGCCCG CCTTGCGGTG CTCAACGCGG AGCTGGGGGC CCTCAAGTCC
TCCCCCTACC GCCCACCATC ACTTAATCGG GTGGACCTCT CCCCCCTGGC GTCCCAGGTT
CAGGTTCAGC GCAGGTCCGT GGCATATCAG CGGGAGGTCC GGGACCGGAT CCGGGACCTG
TTCTCCCGCG GCGCCGCCAC CCGGGCGGAG CTTGACCAGG CAGAGGACCG GCTCCGGCAG
GCGGAGGCGG CCCTGGCCCA GGCGGAGGCG GCCCTTTCGA CCCTCAAGCC CTCCGCCCAG
CCGGCATCCC AGTTCAGCGA GTACGAGGCC ATGCGGCTCA ACCGGATGGC CCAGATCCAG
GCGGAGGCGG AGCAGCTAGG CTCCGTGCGC CACAAGGTGG TAACCAGCCC GGTGGACGGG
GTGGTGCTGG AGCTACTGGT TAACGATCGA GGGTCGGTCC CCATGGGGGG AGGGGTGGTC
ACCCTGGGGG ACCGCTCCAG GGTCCGGATA TGGGGCTACC TGGACCCCAG GTTCATGCCC
TACGGGGAGG TGGGCTCCCC GGTCCGGGTC CGCACGCCCG ACGGGATGAC GGTGCAGGGA
CGGGTGGAGG CGACCCCGAC CCTGAGCACC CAGATCCCGC CGGACCTGTC GGGGCCGTTG
AACGAGCGGG GCAGGGCGGT CCTCATCAGC GTCACCTGCC CGGAGCTACC CGCCGCCTAC
CACGTGGACG GCATAAAGGT GGACCTGCGC TTCCCCTTCT CCTGGAGGAA CGCCATGAGG
TCCCTGGGGA TCCGGATCTA G
 
Protein sequence
MRIRFSRKES PNVDPGGLKV DYGPARRAAL KWRWYLLLLL LFSPLAFLLW KVASYAILVS 
APGVVRLETV TVSSPIQGVV SLPLRPGQLV RRGDQLFSVR DPSVEARLAV LNAELGALKS
SPYRPPSLNR VDLSPLASQV QVQRRSVAYQ REVRDRIRDL FSRGAATRAE LDQAEDRLRQ
AEAALAQAEA ALSTLKPSAQ PASQFSEYEA MRLNRMAQIQ AEAEQLGSVR HKVVTSPVDG
VVLELLVNDR GSVPMGGGVV TLGDRSRVRI WGYLDPRFMP YGEVGSPVRV RTPDGMTVQG
RVEATPTLST QIPPDLSGPL NERGRAVLIS VTCPELPAAY HVDGIKVDLR FPFSWRNAMR
SLGIRI