More than 300 homologs were found in PanDaTox collection
for query gene Swol_0648 on replicon NC_008346
Organism: Syntrophomonas wolfei subsp. wolfei str. Goettingen



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008346  Swol_0648  non-specific DNA-binding protein HBsu  100 
 
 		 110 aa  207  3e-53  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271458  n/a   
 
 
-
 
NC_009012  Cthe_2657  nucleoid protein Hbs  59.55 
 
 		 91 aa  114  3e-25  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000194133  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  59.55 
 
 		 90 aa  113  6.9999999999999995e-25  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  59.55 
 
 		 90 aa  113  6.9999999999999995e-25  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  59.55 
 
 		 90 aa  113  6.9999999999999995e-25  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_010424  Daud_0075  histone family protein DNA-binding protein  58.43 
 
 		 91 aa  112  2.0000000000000002e-24  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  60.67 
 
 		 90 aa  112  2.0000000000000002e-24  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_012034  Athe_2511  histone family protein DNA-binding protein  58.43 
 
 		 92 aa  111  3e-24  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000006954  n/a   
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  58.43 
 
 		 90 aa  111  3e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  58.43 
 
 		 90 aa  111  3e-24  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_010320  Teth514_0687  histone family protein DNA-binding protein  57.3 
 
 		 91 aa  111  4.0000000000000004e-24  Thermoanaerobacter sp. X514  Bacteria  normal  0.105584  n/a   
 
 
-
 
NC_010180  BcerKBAB4_5693  histone family protein DNA-binding protein  60.67 
 
 		 90 aa  111  4.0000000000000004e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0471576  normal  0.0346696 
 
 
-
 
NC_010184  BcerKBAB4_3494  histone family protein DNA-binding protein  59.55 
 
 		 90 aa  110  5e-24  Bacillus weihenstephanensis KBAB4  Bacteria  decreased coverage  0.00000668206  n/a   
 
 
-
 
NC_011725  BCB4264_A3827  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus cereus B4264  Bacteria  unclonable  0.00000818253  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_003909  BCE_3756  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus cereus ATCC 10987  Bacteria  unclonable  0.0000000000231467  n/a   
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005945  BAS3574  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000000000204463  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_005957  BT9727_3473  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  1.59147e-20  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_006274  BCZK3486  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000148823  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_013161  Cyan8802_0983  histone family protein DNA-binding protein  55.32 
 
 		 98 aa  108  2.0000000000000002e-23  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0475372 
 
 
-
 
NC_011658  BCAH187_A3778  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus cereus AH187  Bacteria  unclonable  0.000000000704337  n/a   
 
 
-
 
NC_011772  BCG9842_B1474  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus cereus G9842  Bacteria  unclonable  0.000000000112809  hitchhiker  0.00000484208 
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_007530  GBAA_3858  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  unclonable  0.0000000000000587043  n/a   
 
 
-
 
NC_011773  BCAH820_3740  DNA-binding protein HU  58.43 
 
 		 90 aa  109  2.0000000000000002e-23  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000145695 
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  57.3 
 
 		 90 aa  108  2.0000000000000002e-23  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_012034  Athe_0648  histone family protein DNA-binding protein  57.78 
 
 		 91 aa  108  2.0000000000000002e-23  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000417185  n/a   
 
 
-
 
NC_011726  PCC8801_0956  histone family protein DNA-binding protein  55.32 
 
 		 98 aa  108  2.0000000000000002e-23  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_3085  histone family protein DNA-binding protein  56.18 
 
 		 91 aa  108  3e-23  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000115471  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  59.09 
 
 		 91 aa  107  7.000000000000001e-23  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_008530  LGAS_0894  nucleoid DNA-binding protein  59.09 
 
 		 91 aa  106  1e-22  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  8.08972e-16  hitchhiker  0.000000000000265027 
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  56.18 
 
 		 90 aa  105  2e-22  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  57.3 
 
 		 90 aa  105  2e-22  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  56.18 
 
 		 90 aa  105  2e-22  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  56.18 
 
 		 90 aa  104  3e-22  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  56.18 
 
 		 90 aa  104  3e-22  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  56.18 
 
 		 90 aa  104  3e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  56.18 
 
 		 90 aa  104  3e-22  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  56.18 
 
 		 90 aa  104  3e-22  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  56.18 
 
 		 90 aa  105  3e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_013385  Adeg_2069  histone family protein DNA-binding protein  57.78 
 
 		 95 aa  105  3e-22  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  56.18 
 
 		 90 aa  104  3e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  59.09 
 
 		 91 aa  104  3e-22  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  56.18 
 
 		 90 aa  104  3e-22  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011777  BCAH820_B0184  DNA-binding protein HU 1  57.3 
 
 		 90 aa  103  6e-22  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_007644  Moth_0085  nucleoid protein Hbs  53.33 
 
 		 91 aa  102  1e-21  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0539634  normal  1 
 
 
-
 
NC_011830  Dhaf_0135  histone family protein DNA-binding protein  55.06 
 
 		 91 aa  102  1e-21  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00267128  n/a   
 
 
-
 
NC_011655  BCAH187_C0183  DNA-binding protein HU 1  56.18 
 
 		 90 aa  102  1e-21  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000296943  hitchhiker  2.26878e-36 
 
 
-
 
NC_008528  OEOE_1010  nucleoid protein Hbs  56.82 
 
 		 91 aa  102  1e-21  Oenococcus oeni PSU-1  Bacteria  normal  0.301873  n/a   
 
 
-
 
NC_009253  Dred_0115  histone family protein DNA-binding protein  54.44 
 
 		 95 aa  102  2e-21  Desulfotomaculum reducens MI-1  Bacteria  normal  0.552761  n/a   
 
 
-
 
NC_011775  BCG9842_0074  DNA-binding protein HU  53.93 
 
 		 90 aa  102  2e-21  Bacillus cereus G9842  Bacteria  unclonable  0.00000000000481156  n/a   
 
 
-
 
NC_008346  Swol_0083  DNA-binding protein HU (DNA-binding protein II)  55.06 
 
 		 90 aa  100  6e-21  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  1  n/a   
 
 
-
 
NC_007969  Pcryo_1653  histone-like DNA-binding protein  50.57 
 
 		 90 aa  100  9e-21  Psychrobacter cryohalolentis K5  Bacteria  unclonable  0.00000047794  unclonable  0.0000440637 
 
 
 
NC_011661  Dtur_1514  histone family protein DNA-binding protein  52.81 
 
 		 91 aa  99.4  2e-20  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000108882  n/a   
 
 
-
 
NC_013216  Dtox_0219  histone family protein DNA-binding protein  50.56 
 
 		 96 aa  98.6  2e-20  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.132966  normal  1 
 
 
-
 
NC_008261  CPF_2802  DNA-binding protein HU  52.81 
 
 		 91 aa  99  2e-20  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000000141643  n/a   
 
 
-
 
NC_008262  CPR_2488  DNA-binding protein HU  52.81 
 
 		 91 aa  99  2e-20  Clostridium perfringens SM101  Bacteria  unclonable  0.0000000000405619  n/a   
 
 
-
 
NC_008532  STER_1175  histone-like DNA-binding protein  53.41 
 
 		 91 aa  99.4  2e-20  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.000000211181  n/a   
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  49.44 
 
 		 90 aa  98.6  3e-20  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_007204  Psyc_1474  putative DNA-binding protein HU-beta  49.43 
 
 		 90 aa  98.2  3e-20  Psychrobacter arcticus 273-4  Bacteria  hitchhiker  0.0000000000000997119  hitchhiker  0.0000985943 
 
 
-
 
NC_007520  Tcr_1180  histone-like DNA-binding protein  53.93 
 
 		 90 aa  98.6  3e-20  Thiomicrospira crunogena XCL-2  Bacteria  unclonable  2.95654e-16  n/a   
 
 
-
 
NC_013205  Aaci_0186  histone family protein DNA-binding protein  54.02 
 
 		 90 aa  97.8  4e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_0070  nucleoid protein Hbs  53.93 
 
 		 92 aa  98.2  4e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.0240129  normal  1 
 
 
-
 
NC_008740  Maqu_1837  histone family protein DNA-binding protein  52.81 
 
 		 90 aa  98.2  4e-20  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.00431989  n/a   
 
 
-
 
NC_008312  Tery_1610  nucleoid protein Hbs  54.44 
 
 		 95 aa  97.8  4e-20  Trichodesmium erythraeum IMS101  Bacteria  normal  0.148246  normal  0.783199 
 
 
-
 
NC_014248  Aazo_0318  histone family protein DNA-binding protein  54.44 
 
 		 94 aa  97.8  5e-20  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2873  transcriptional regulator HU subunit beta  49.44 
 
 		 90 aa  97.4  6e-20  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0600  histone family protein DNA-binding protein  50.56 
 
 		 90 aa  97.4  6e-20  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013206  Aaci_3021  histone family protein DNA-binding protein  48.35 
 
 		 91 aa  97.1  7e-20  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2492  histone-like DNA-binding protein  49.44 
 
 		 90 aa  97.1  8e-20  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00401844  n/a   
 
 
-
 
NC_010506  Swoo_4353  histone family protein DNA-binding protein  50.56 
 
 		 90 aa  97.1  9e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_2424  histone family protein DNA-binding protein  48.35 
 
 		 91 aa  96.7  9e-20  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000000394497  n/a   
 
 
-
 
NC_012917  PC1_1051  transcriptional regulator HU subunit beta  49.44 
 
 		 90 aa  96.7  1e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.593082  n/a   
 
 
-
 
NC_007484  Noc_1772  histone-like DNA-binding protein  49.44 
 
 		 90 aa  96.7  1e-19  Nitrosococcus oceani ATCC 19707  Bacteria  decreased coverage  0.000757515  n/a   
 
 
-
 
NC_012912  Dd1591_3065  transcriptional regulator HU subunit beta  48.31 
 
 		 90 aa  96.3  1e-19  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_3261  transcriptional regulator HU subunit beta  49.44 
 
 		 90 aa  96.7  1e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_1108  nucleoid protein Hbs  48.35 
 
 		 91 aa  96.3  1e-19  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0932961  normal  0.770831 
 
 
-
 
NC_008700  Sama_1227  HU family DNA-binding protein  48.31 
 
 		 90 aa  96.3  1e-19  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000165625  normal  1 
 
 
-
 
NC_009901  Spea_3731  histone family protein DNA-binding protein  50.56 
 
 		 90 aa  95.9  2e-19  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_1493  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000000388309  n/a   
 
 
-
 
NC_004347  SO_1797  HU family DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_1607  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000000022491  n/a   
 
 
-
 
NC_009997  Sbal195_1630  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella baltica OS195  Bacteria  unclonable  0.0000000159632  normal  1 
 
 
-
 
NC_009665  Shew185_1596  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella baltica OS185  Bacteria  unclonable  0.00000000000169185  n/a   
 
 
-
 
NC_011663  Sbal223_2747  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000000276504  normal  0.581764 
 
 
-
 
NC_008321  Shewmr4_2492  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella sp. MR-4  Bacteria  unclonable  0.000000000348442  normal  0.0842071 
 
 
-
 
NC_008322  Shewmr7_2560  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.5  2e-19  Shewanella sp. MR-7  Bacteria  unclonable  0.000000135506  normal  0.0536414 
 
 
-
 
NC_008340  Mlg_2285  histone family protein DNA-binding protein  47.19 
 
 		 90 aa  95.5  2e-19  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0556838  normal  1 
 
 
-
 
NC_008345  Sfri_2593  histone family protein DNA-binding protein  48.31 
 
 		 91 aa  95.5  2e-19  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.0000000173721  n/a   
 
 
-
 
NC_008577  Shewana3_2658  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.9  2e-19  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000180426  normal  0.730265 
 
 
-
 
NC_009092  Shew_2505  histone family protein DNA-binding protein  48.31 
 
 		 90 aa  95.1  3e-19  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000000791734  normal  0.581146 
 
 
-
 
NC_007413  Ava_1767  nucleoid protein Hbs  52.22 
 
 		 94 aa  95.1  3e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
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