21 homologs were found in PanDaTox collection
for query gene Sputcn32_1648 on replicon NC_009438
Organism: Shewanella putrefaciens CN-32



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009438  Sputcn32_1648  adenosylmethionine decarboxylase  100 
 
 
323 aa  674    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2516  Adenosylmethionine decarboxylase  70.61 
 
 
313 aa  457  9.999999999999999e-129  Shewanella baltica OS223  Bacteria  normal  0.300006  normal 
 
 
-
 
NC_009052  Sbal_1769  adenosylmethionine decarboxylase  70.61 
 
 
313 aa  459  9.999999999999999e-129  Shewanella baltica OS155  Bacteria  normal  0.105194  n/a   
 
 
-
 
NC_009997  Sbal195_1806  adenosylmethionine decarboxylase  70.29 
 
 
313 aa  457  1e-127  Shewanella baltica OS195  Bacteria  normal  0.422489  normal 
 
 
-
 
NC_009665  Shew185_1762  adenosylmethionine decarboxylase  70.61 
 
 
313 aa  456  1e-127  Shewanella baltica OS185  Bacteria  normal  0.0146422  n/a   
 
 
-
 
NC_004347  SO_1871  S-adenosylmethionine decarboxylase proenzyme, putative  60.19 
 
 
312 aa  390  1e-107  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_1625  S-adenosylmethionine decarboxylase  57.83 
 
 
311 aa  371  1e-102  Shewanella sp. ANA-3  Bacteria  normal  0.829787  normal  0.0601628 
 
 
-
 
NC_008322  Shewmr7_1633  S-adenosylmethionine decarboxylase  57.83 
 
 
311 aa  372  1e-102  Shewanella sp. MR-7  Bacteria  normal  normal  0.039164 
 
 
-
 
NC_008700  Sama_1962  adenosylmethionine decarboxylase  58.15 
 
 
309 aa  370  1e-101  Shewanella amazonensis SB2B  Bacteria  normal  0.468278  normal  0.115217 
 
 
-
 
NC_008321  Shewmr4_1558  S-adenosylmethionine decarboxylase  58.15 
 
 
311 aa  370  1e-101  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1699  adenosylmethionine decarboxylase  54.95 
 
 
309 aa  352  4e-96  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2058  adenosylmethionine decarboxylase  52.08 
 
 
309 aa  342  5.999999999999999e-93  Shewanella woodyi ATCC 51908  Bacteria  normal  0.190241  normal  0.282067 
 
 
-
 
NC_007954  Sden_2279  adenosylmethionine decarboxylase  53.67 
 
 
311 aa  339  4e-92  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000137147  n/a   
 
 
-
 
NC_009831  Ssed_2608  adenosylmethionine decarboxylase  50.48 
 
 
309 aa  327  2.0000000000000001e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.383871 
 
 
-
 
NC_009901  Spea_2479  adenosylmethionine decarboxylase  49.84 
 
 
306 aa  315  7e-85  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00737009  n/a   
 
 
-
 
NC_009092  Shew_1620  adenosylmethionine decarboxylase  42.04 
 
 
306 aa  241  1e-62  Shewanella loihica PV-4  Bacteria  normal  0.504396  normal  0.0565321 
 
 
-
 
NC_008709  Ping_0374  S-adenosylmethionine decarboxylase  35.45 
 
 
276 aa  143  5e-33  Psychromonas ingrahamii 37  Bacteria  normal  0.167769  normal 
 
 
-
 
NC_011669  PHATRDRAFT_3362  predicted protein  27.01 
 
 
322 aa  100  4e-20  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_006670  CNA00140  adenosylmethionine decarboxylase, putative  25.17 
 
 
460 aa  66.6  0.0000000005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0825074  n/a   
 
 
-
 
NC_009047  PICST_85160  S-adenosylmethionine decarboxylase  28.06 
 
 
441 aa  57  0.0000005  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal  0.805326 
 
 
-
 
BN001302  ANIA_08231  S-adenosylmethionine decarboxylase Fragment (EC 4.1.1.50) [Source:UniProtKB/TrEMBL;Acc:Q9Y8A3]  34.48 
 
 
304 aa  51.2  0.00003  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.47197 
 
 
-
 
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