| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1633 |
|---|
| Symbol | |
|---|
| ID | 4257086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1920800 |
|---|
| End bp | 1921735 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638122293 |
|---|
| Product | S-adenosylmethionine decarboxylase |
|---|
| Protein accession | YP_737685 |
|---|
| Protein GI | 114047135 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00535] S-adenosylmethionine decarboxylase proenzyme, eukaryotic form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.039164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTG AAGGCGCGGA AAAAAAGCTT GAGATCAGGC TCACACCCAA GCTGGCATCA
CTACGCCTGC GGGAGTATGG CTTTTGGTCG ACGCTGGTGG CCTGTGCGAA TGCAGAAATC
CTCTCAACAA GCAGTAATCA TGCCTGCGAT GCCTATCTGC TGAGTGAATC GAGCCTGTTC
GTCTGGGACG ATAAAATTCT GATCCTTACT TGTGGCAATA GCACCCTGAT TGAGGCGGCC
AGCTACTTTA TTAACGCCTT AGGGACTGAG CACATCGCCG CGCTCTGCTA TCAGCGCAAG
AATGAGTACC AAGCCCAGTT ACAAAGCACC AGCTTTGCTG ACGATATTGC TAAATTGCGA
CTCTTGATCC CTGGCGAAGC CTTTCGAATG GGTCATTTGG ATTCACACCA TCACTATGTG
TTTTGCGCCG AAAATCAATC GGTTTCCTCA AGCGAAACCA GCCTTGAACT GATGATGTAC
CACATCCGTG GCGAGCTTGC CGAGTATCTC AAGCTGCCTA CACAAACCGA GCAGGGGATT
TATCAGCAGC TTGGCTTGCA ACAACTCTTC GGCGATTTTC AGCTAGATAT GCATTGTTTT
CAGCCTGCCG GGTTTTCGTT GAATGCGATA CGAGGTGCTG ACTATTTTAC CTTGCATATC
ACACCATCGA TGGGACAAGG GGATAATTCC TATATCAGTT TTGAGACTAA TCTGGATTTA
GCCGTTTATC CCCATCCAGT CGTGGCGCGA TTGCTGGATT TATTCTCCCC AATCAGTTGG
GATTTGATTA ATTTTAATCA GCCCATCAAC ACGGCGGGAT TTCCTGCGCA TATTTGCTTA
GGTCAAGGTT TAGTGACAAC TGGGTCGGGT AGCCAGATTT CCTTCCGTCA CTATCAGCAG
CTTGAACCCC AAATACTGCA ACCTGAGTTT ATCTAG
|
|---|
| Protein sequence | MFFEGAEKKL EIRLTPKLAS LRLREYGFWS TLVACANAEI LSTSSNHACD AYLLSESSLF
VWDDKILILT CGNSTLIEAA SYFINALGTE HIAALCYQRK NEYQAQLQST SFADDIAKLR
LLIPGEAFRM GHLDSHHHYV FCAENQSVSS SETSLELMMY HIRGELAEYL KLPTQTEQGI
YQQLGLQQLF GDFQLDMHCF QPAGFSLNAI RGADYFTLHI TPSMGQGDNS YISFETNLDL
AVYPHPVVAR LLDLFSPISW DLINFNQPIN TAGFPAHICL GQGLVTTGSG SQISFRHYQQ
LEPQILQPEF I
|
|---|
| |