21 homologs were found in PanDaTox collection
for query gene SO_1871 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004347  SO_1871  S-adenosylmethionine decarboxylase proenzyme, putative  100 
 
 		 312 aa  652    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
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NC_008577  Shewana3_1625  S-adenosylmethionine decarboxylase  71.7 
 
 		 311 aa  469  1.0000000000000001e-131  Shewanella sp. ANA-3  Bacteria  normal  0.829787  normal  0.0601628 
 
 
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NC_008321  Shewmr4_1558  S-adenosylmethionine decarboxylase  71.7 
 
 		 311 aa  465  9.999999999999999e-131  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
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NC_008322  Shewmr7_1633  S-adenosylmethionine decarboxylase  71.38 
 
 		 311 aa  466  9.999999999999999e-131  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.039164 
 
 
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NC_009438  Sputcn32_1648  adenosylmethionine decarboxylase  60.19 
 
 		 323 aa  390  1e-107  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
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NC_009997  Sbal195_1806  adenosylmethionine decarboxylase  55.38 
 
 		 313 aa  365  1e-100  Shewanella baltica OS195  Bacteria  normal  0.422489  normal  1 
 
 
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NC_009052  Sbal_1769  adenosylmethionine decarboxylase  55.27 
 
 		 313 aa  363  3e-99  Shewanella baltica OS155  Bacteria  normal  0.105194  n/a   
 
 
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NC_009665  Shew185_1762  adenosylmethionine decarboxylase  55.59 
 
 		 313 aa  362  5.0000000000000005e-99  Shewanella baltica OS185  Bacteria  normal  0.0146422  n/a   
 
 
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NC_011663  Sbal223_2516  Adenosylmethionine decarboxylase  55.27 
 
 		 313 aa  362  6e-99  Shewanella baltica OS223  Bacteria  normal  0.300006  normal  1 
 
 
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NC_008345  Sfri_1699  adenosylmethionine decarboxylase  50 
 
 		 309 aa  319  3.9999999999999996e-86  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_007954  Sden_2279  adenosylmethionine decarboxylase  49.36 
 
 		 311 aa  313  2.9999999999999996e-84  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000137147  n/a   
 
 
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NC_010506  Swoo_2058  adenosylmethionine decarboxylase  46.5 
 
 		 309 aa  307  2.0000000000000002e-82  Shewanella woodyi ATCC 51908  Bacteria  normal  0.190241  normal  0.282067 
 
 
-
 
NC_008700  Sama_1962  adenosylmethionine decarboxylase  48.72 
 
 		 309 aa  304  1.0000000000000001e-81  Shewanella amazonensis SB2B  Bacteria  normal  0.468278  normal  0.115217 
 
 
-
 
NC_009901  Spea_2479  adenosylmethionine decarboxylase  46.41 
 
 		 306 aa  295  8e-79  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00737009  n/a   
 
 
-
 
NC_009831  Ssed_2608  adenosylmethionine decarboxylase  45.81 
 
 		 309 aa  292  5e-78  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.383871 
 
 
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NC_009092  Shew_1620  adenosylmethionine decarboxylase  47.59 
 
 		 306 aa  279  5e-74  Shewanella loihica PV-4  Bacteria  normal  0.504396  normal  0.0565321 
 
 
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NC_008709  Ping_0374  S-adenosylmethionine decarboxylase  36.6 
 
 		 276 aa  159  8e-38  Psychromonas ingrahamii 37  Bacteria  normal  0.167769  normal  1 
 
 
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NC_011669  PHATRDRAFT_3362  predicted protein  29.11 
 
 		 322 aa  95.9  8e-19  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  1  n/a   
 
 
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NC_006670  CNA00140  adenosylmethionine decarboxylase, putative  27.34 
 
 		 460 aa  73.9  0.000000000003  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0825074  n/a   
 
 
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NC_009047  PICST_85160  S-adenosylmethionine decarboxylase  30.54 
 
 		 441 aa  62.4  0.00000001  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.805326 
 
 
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BN001302  ANIA_08231  S-adenosylmethionine decarboxylase Fragment (EC 4.1.1.50) [Source:UniProtKB/TrEMBL;Acc:Q9Y8A3]  35.44 
 
 		 304 aa  52  0.00001  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.47197 
 
 
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