21 homologs were found in PanDaTox collection
for query gene Sfri_1699 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_1699  adenosylmethionine decarboxylase  100 
 
 		 309 aa  642    Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1962  adenosylmethionine decarboxylase  56.86 
 
 		 309 aa  371  1e-102  Shewanella amazonensis SB2B  Bacteria  normal  0.468278  normal  0.115217 
 
 
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NC_009997  Sbal195_1806  adenosylmethionine decarboxylase  58.79 
 
 		 313 aa  363  2e-99  Shewanella baltica OS195  Bacteria  normal  0.422489  normal  1 
 
 
-
 
NC_009052  Sbal_1769  adenosylmethionine decarboxylase  58.47 
 
 		 313 aa  358  5e-98  Shewanella baltica OS155  Bacteria  normal  0.105194  n/a   
 
 
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NC_011663  Sbal223_2516  Adenosylmethionine decarboxylase  57.83 
 
 		 313 aa  356  2.9999999999999997e-97  Shewanella baltica OS223  Bacteria  normal  0.300006  normal  1 
 
 
-
 
NC_007954  Sden_2279  adenosylmethionine decarboxylase  53.72 
 
 		 311 aa  356  2.9999999999999997e-97  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000137147  n/a   
 
 
-
 
NC_009665  Shew185_1762  adenosylmethionine decarboxylase  58.77 
 
 		 313 aa  352  2.9999999999999997e-96  Shewanella baltica OS185  Bacteria  normal  0.0146422  n/a   
 
 
-
 
NC_009438  Sputcn32_1648  adenosylmethionine decarboxylase  54.95 
 
 		 323 aa  352  4e-96  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2058  adenosylmethionine decarboxylase  52.43 
 
 		 309 aa  346  4e-94  Shewanella woodyi ATCC 51908  Bacteria  normal  0.190241  normal  0.282067 
 
 
-
 
NC_009831  Ssed_2608  adenosylmethionine decarboxylase  51.78 
 
 		 309 aa  338  5.9999999999999996e-92  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.383871 
 
 
-
 
NC_008577  Shewana3_1625  S-adenosylmethionine decarboxylase  52.24 
 
 		 311 aa  322  3e-87  Shewanella sp. ANA-3  Bacteria  normal  0.829787  normal  0.0601628 
 
 
-
 
NC_004347  SO_1871  S-adenosylmethionine decarboxylase proenzyme, putative  50 
 
 		 312 aa  319  3.9999999999999996e-86  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_1633  S-adenosylmethionine decarboxylase  50.96 
 
 		 311 aa  317  1e-85  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.039164 
 
 
-
 
NC_008321  Shewmr4_1558  S-adenosylmethionine decarboxylase  50.96 
 
 		 311 aa  315  9e-85  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2479  adenosylmethionine decarboxylase  48.88 
 
 		 306 aa  308  9e-83  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00737009  n/a   
 
 
-
 
NC_009092  Shew_1620  adenosylmethionine decarboxylase  44.66 
 
 		 306 aa  281  7.000000000000001e-75  Shewanella loihica PV-4  Bacteria  normal  0.504396  normal  0.0565321 
 
 
-
 
NC_008709  Ping_0374  S-adenosylmethionine decarboxylase  32.46 
 
 		 276 aa  140  3.9999999999999997e-32  Psychromonas ingrahamii 37  Bacteria  normal  0.167769  normal  1 
 
 
-
 
NC_011669  PHATRDRAFT_3362  predicted protein  30.87 
 
 		 322 aa  120  3.9999999999999996e-26  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  1  n/a   
 
 
-
 
NC_006670  CNA00140  adenosylmethionine decarboxylase, putative  26.96 
 
 		 460 aa  83.2  0.000000000000005  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0825074  n/a   
 
 
-
 
NC_009047  PICST_85160  S-adenosylmethionine decarboxylase  28.5 
 
 		 441 aa  61.6  0.00000002  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.805326 
 
 
-
 
BN001302  ANIA_08231  S-adenosylmethionine decarboxylase Fragment (EC 4.1.1.50) [Source:UniProtKB/TrEMBL;Acc:Q9Y8A3]  35.29 
 
 		 304 aa  59.7  0.00000007  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.47197 
 
 
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