| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1962 |
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| Symbol | |
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| ID | 4604212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2390319 |
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| End bp | 2391248 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639781339 |
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| Product | adenosylmethionine decarboxylase |
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| Protein accession | YP_927837 |
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| Protein GI | 119775097 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00535] S-adenosylmethionine decarboxylase proenzyme, eukaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.468278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.115217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTTTG AAGGTTCAGA AAAAAAAATA GAAGTCATAG TCACCCGCGA ATTCGGCTCA
CTCAGAGCAC TGGGGCGTGA ATTCTGGAAA GAGATGGTGG CCTGCGCCAA TGCGGAAATC
CTCTCCAGTA TCAACAATGA ACACTGCGAT GCCTACTTGC TCAGCGAATC GAGTTTGTTT
GTCTGGGACG ACAGGTTCCT GATGTTGACC TGCGGCACCA CAACCCTCGC TAAAGCCGTT
GTCCGTTTTA TCAATGAAGT CGGTGCTGAA AAGATTGCTT TTGCCAGCTA TCAGCGCAAA
AACGAGTATC TGTCACACTT GCAAAGCAGT GCCTTTACCG ACGATTTAAC CGCCATCCGC
GCGTTGTTGC CGGGGGATGC ATTCAGAATC GGACATCTGG ATTCCCACCA TCACTATATT
TTCACCAGCA ACAAACCTTA CGAAGCAACT GCAGATGACC ATACCAGTGA GCTTTTGATG
TACCACATCC GTGGTGAGGC TGCCGATTAC TTGCGCAGTG AACATCAGAG TGCTGCTGAA
ATCCGCCGCC TGTTGCAATT GGATGCCATG TTACCCGGGT TTGTATTTGA CGACTTTTTG
TTTGAACCTT TTGGGTATTC TATCAATGGC ATCCGTGGCG ATCGCTACAT GACCATTCAT
ATTACGCCCC AGGAAAACAG CTCCTACGTG AGCTTTGAAA CCAACTTGCC GCTGGAAGGC
GAATATCGTC AAATCTTCTC TCGTTTGCTG GGTATTCTAA ATCCGGGCAG TTGGGATGAG
ATTGGGTTTA ACGCCCAGCG TCATACCGAA AACTACCCCG CGCACCTGTG CCTGGGAAGC
TGTGCCTTAT CCATGTCCCA GGGGTATAGG GTGGAGTTCA GCCACTATCA GCAGTTGTGT
CATGAAGTGC TTATTCCCGA GCCCATGTAA
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| Protein sequence | MFFEGSEKKI EVIVTREFGS LRALGREFWK EMVACANAEI LSSINNEHCD AYLLSESSLF
VWDDRFLMLT CGTTTLAKAV VRFINEVGAE KIAFASYQRK NEYLSHLQSS AFTDDLTAIR
ALLPGDAFRI GHLDSHHHYI FTSNKPYEAT ADDHTSELLM YHIRGEAADY LRSEHQSAAE
IRRLLQLDAM LPGFVFDDFL FEPFGYSING IRGDRYMTIH ITPQENSSYV SFETNLPLEG
EYRQIFSRLL GILNPGSWDE IGFNAQRHTE NYPAHLCLGS CALSMSQGYR VEFSHYQQLC
HEVLIPEPM
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