21 homologs were found in PanDaTox collection
for query gene Sama_1962 on replicon NC_008700
Organism: Shewanella amazonensis SB2B



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008700  Sama_1962  adenosylmethionine decarboxylase  100 
 
 		 309 aa  645    Shewanella amazonensis SB2B  Bacteria  normal  0.468278  normal  0.115217 
 
 
-
 
NC_010506  Swoo_2058  adenosylmethionine decarboxylase  59.61 
 
 		 309 aa  376  1e-103  Shewanella woodyi ATCC 51908  Bacteria  normal  0.190241  normal  0.282067 
 
 
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NC_008345  Sfri_1699  adenosylmethionine decarboxylase  56.86 
 
 		 309 aa  371  1e-102  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_2279  adenosylmethionine decarboxylase  55.66 
 
 		 311 aa  369  1e-101  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000137147  n/a   
 
 
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NC_009831  Ssed_2608  adenosylmethionine decarboxylase  57.93 
 
 		 309 aa  368  1e-101  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.383871 
 
 
-
 
NC_009438  Sputcn32_1648  adenosylmethionine decarboxylase  58.15 
 
 		 323 aa  370  1e-101  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1806  adenosylmethionine decarboxylase  57.51 
 
 		 313 aa  360  2e-98  Shewanella baltica OS195  Bacteria  normal  0.422489  normal  1 
 
 
-
 
NC_009052  Sbal_1769  adenosylmethionine decarboxylase  56.87 
 
 		 313 aa  355  3.9999999999999996e-97  Shewanella baltica OS155  Bacteria  normal  0.105194  n/a   
 
 
-
 
NC_011663  Sbal223_2516  Adenosylmethionine decarboxylase  56.23 
 
 		 313 aa  352  4e-96  Shewanella baltica OS223  Bacteria  normal  0.300006  normal  1 
 
 
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NC_009665  Shew185_1762  adenosylmethionine decarboxylase  56.23 
 
 		 313 aa  350  1e-95  Shewanella baltica OS185  Bacteria  normal  0.0146422  n/a   
 
 
-
 
NC_009901  Spea_2479  adenosylmethionine decarboxylase  52.26 
 
 		 306 aa  331  9e-90  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00737009  n/a   
 
 
-
 
NC_008577  Shewana3_1625  S-adenosylmethionine decarboxylase  51.28 
 
 		 311 aa  319  3.9999999999999996e-86  Shewanella sp. ANA-3  Bacteria  normal  0.829787  normal  0.0601628 
 
 
-
 
NC_008322  Shewmr7_1633  S-adenosylmethionine decarboxylase  50.8 
 
 		 311 aa  316  3e-85  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.039164 
 
 
-
 
NC_008321  Shewmr4_1558  S-adenosylmethionine decarboxylase  50.65 
 
 		 311 aa  313  1.9999999999999998e-84  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_1871  S-adenosylmethionine decarboxylase proenzyme, putative  48.72 
 
 		 312 aa  304  1.0000000000000001e-81  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_1620  adenosylmethionine decarboxylase  46.77 
 
 		 306 aa  267  2e-70  Shewanella loihica PV-4  Bacteria  normal  0.504396  normal  0.0565321 
 
 
-
 
NC_008709  Ping_0374  S-adenosylmethionine decarboxylase  35.83 
 
 		 276 aa  144  2e-33  Psychromonas ingrahamii 37  Bacteria  normal  0.167769  normal  1 
 
 
-
 
NC_011669  PHATRDRAFT_3362  predicted protein  30.89 
 
 		 322 aa  122  6e-27  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  1  n/a   
 
 
-
 
NC_006670  CNA00140  adenosylmethionine decarboxylase, putative  29.66 
 
 		 460 aa  94.7  2e-18  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0825074  n/a   
 
 
-
 
NC_009047  PICST_85160  S-adenosylmethionine decarboxylase  26.44 
 
 		 441 aa  54.3  0.000003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.805326 
 
 
-
 
BN001302  ANIA_08231  S-adenosylmethionine decarboxylase Fragment (EC 4.1.1.50) [Source:UniProtKB/TrEMBL;Acc:Q9Y8A3]  28.24 
 
 		 304 aa  53.9  0.000003  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.47197 
 
 
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