21 homologs were found in PanDaTox collection
for query gene Swoo_2058 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010506  Swoo_2058  adenosylmethionine decarboxylase  100 
 
 		 309 aa  642    Shewanella woodyi ATCC 51908  Bacteria  normal  0.190241  normal  0.282067 
 
 
-
 
NC_009831  Ssed_2608  adenosylmethionine decarboxylase  70.87 
 
 		 309 aa  452  1.0000000000000001e-126  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.383871 
 
 
-
 
NC_008700  Sama_1962  adenosylmethionine decarboxylase  59.61 
 
 		 309 aa  376  1e-103  Shewanella amazonensis SB2B  Bacteria  normal  0.468278  normal  0.115217 
 
 
-
 
NC_009901  Spea_2479  adenosylmethionine decarboxylase  57.28 
 
 		 306 aa  358  7e-98  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00737009  n/a   
 
 
-
 
NC_008345  Sfri_1699  adenosylmethionine decarboxylase  52.43 
 
 		 309 aa  346  4e-94  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_1648  adenosylmethionine decarboxylase  52.08 
 
 		 323 aa  342  5.999999999999999e-93  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_1806  adenosylmethionine decarboxylase  52.4 
 
 		 313 aa  335  3.9999999999999995e-91  Shewanella baltica OS195  Bacteria  normal  0.422489  normal  1 
 
 
-
 
NC_009052  Sbal_1769  adenosylmethionine decarboxylase  52.08 
 
 		 313 aa  333  3e-90  Shewanella baltica OS155  Bacteria  normal  0.105194  n/a   
 
 
-
 
NC_011663  Sbal223_2516  Adenosylmethionine decarboxylase  51.44 
 
 		 313 aa  328  5.0000000000000004e-89  Shewanella baltica OS223  Bacteria  normal  0.300006  normal  1 
 
 
-
 
NC_007954  Sden_2279  adenosylmethionine decarboxylase  51.29 
 
 		 311 aa  328  7e-89  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.000137147  n/a   
 
 
-
 
NC_009665  Shew185_1762  adenosylmethionine decarboxylase  51.44 
 
 		 313 aa  323  2e-87  Shewanella baltica OS185  Bacteria  normal  0.0146422  n/a   
 
 
-
 
NC_008322  Shewmr7_1633  S-adenosylmethionine decarboxylase  46.47 
 
 		 311 aa  311  6.999999999999999e-84  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.039164 
 
 
-
 
NC_008577  Shewana3_1625  S-adenosylmethionine decarboxylase  47.12 
 
 		 311 aa  308  5.9999999999999995e-83  Shewanella sp. ANA-3  Bacteria  normal  0.829787  normal  0.0601628 
 
 
-
 
NC_004347  SO_1871  S-adenosylmethionine decarboxylase proenzyme, putative  46.5 
 
 		 312 aa  307  2.0000000000000002e-82  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_1558  S-adenosylmethionine decarboxylase  46.47 
 
 		 311 aa  306  3e-82  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_1620  adenosylmethionine decarboxylase  47.06 
 
 		 306 aa  291  6e-78  Shewanella loihica PV-4  Bacteria  normal  0.504396  normal  0.0565321 
 
 
-
 
NC_008709  Ping_0374  S-adenosylmethionine decarboxylase  36.57 
 
 		 276 aa  160  4e-38  Psychromonas ingrahamii 37  Bacteria  normal  0.167769  normal  1 
 
 
-
 
NC_011669  PHATRDRAFT_3362  predicted protein  29.65 
 
 		 322 aa  100  3e-20  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  1  n/a   
 
 
-
 
NC_006670  CNA00140  adenosylmethionine decarboxylase, putative  22.86 
 
 		 460 aa  68.6  0.0000000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0825074  n/a   
 
 
-
 
NC_009047  PICST_85160  S-adenosylmethionine decarboxylase  27.95 
 
 		 441 aa  53.5  0.000005  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.805326 
 
 
-
 
BN001302  ANIA_08231  S-adenosylmethionine decarboxylase Fragment (EC 4.1.1.50) [Source:UniProtKB/TrEMBL;Acc:Q9Y8A3]  32.97 
 
 		 304 aa  48.1  0.0002  Aspergillus nidulans FGSC A4  Eukaryota  normal  1  normal  0.47197 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>