| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNA00140 |
|---|
| Symbol | |
|---|
| ID | 3253834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006670 |
|---|
| Strand | - |
|---|
| Start bp | 43545 |
|---|
| End bp | 45210 |
|---|
| Gene Length | 1666 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | 638252342 |
|---|
| Product | adenosylmethionine decarboxylase, putative |
|---|
| Protein accession | XP_566443 |
|---|
| Protein GI | 58258061 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00535] S-adenosylmethionine decarboxylase proenzyme, eukaryotic form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0825074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CCGCAACAAG TCGACAAGAC CTCCCAAAAA AGTCCCTTGA TAAGGCTCTC CCCTATTTAG
AAACCCCCGA CCCAGTCGAA ACCAATAGTA GAGACCAAAA GGAGAGCTTA TTAAGCCCTT
TACCAGCTAT GACCGCCGAG CTCACTCCTT CCATCGAAGA ACAGGCACTC ACTTCTCCGG
GCCCATTTGA AGGTCCCGAA AAGCTTTTGG AAGTATGGTT CGCCCCTTCT ATAGAAGAGT
TGCCTTCCGC TGAGGAGGTT GAGGGGAAAG TTGCCGGCGG GTTGAATGCG CGTCCTGCAA
AGGAAAATGG AGAATGGCAG GGCTTGAGGA AGGTGCCGAG AGAGGTCTGG GAGGAGATGT
TGGATATTGT AAAGTGCAAG GTTTTGAGTA TGGTAGAAGG CGATGATTTG GATGCTTACC
TCTTATCGTG CGTCCTTCAT TCGTCTTTTC TATTCATAAC TGCTAATGGT GTATTTAATT
GATTACGGAA TTAGGGAATC ATCACTCTTC GTCGCTCCTC ATGTGCTTAT CCTCAAGACA
TGCGGCACCA CCCTCAACCT TCTCGGTCTT TATCGTATCA TTGAAATTGC GCGTGAATAC
TGTGGATTCA ACAATGTGTG GAGGTGCTTT TATTCGAGAA AGAGTTTTTT CTTCCCAGAG
AGGCAACAAG GTCCTCATAG GGATTGGAGA GATGAAGTGC AGTTTTTGGA CAGCGTCTTT
GGTAAGTCCA AAAGCCCAAA TTTCTTTCAT GTGCCGTACA GCTATGAAGG AGAAAAGTGA
TTTGCCGCTA ACCAACATGG AAATAATAGG AACGGCGGGT GCAGCGTATA CTGTTGGTCC
TATGAACAGG GACCATTGGC TCTTATACCT CACGACACCC AACTCCCAAC CTATCCTCCC
GTCCGACCCC AAACCTTGCA CTCTTTCTCT CCCTGCGCCT TCCCCTTCTT CTTCTATTCC
TACATTCTCC TCGTCTTCTA CCGTCACGTA CCAAGACACT ACCCTCGAAA TCCTCATGAC
CCATCTCTCT CCCTCTGCCC GTGCTCCCTT TTTCCACGAC TCGGACTCCT TCTCCTCTCC
CTCGACCACC CCGGGCCATG TCCTTGGTGA GGCCATTTCC CACAAGCTTG GGATTGATGC
CCTTTTCTCA AAGGACGAGA CCACCTTGGA TTCGTTTGGG TTTGATCCAT GTGGGTATAG
CGCAAATGCG GTGATTGGGA GTGGACTGCC TGTTTCGGGC AAGGGCGGCA AGGAAGGCGG
GGGTTACTTT ACGATTCATG TGACTCCTGA AGAAGGATGG TCATATGCTT CGTTCGAGTG
CAACGTCCCT CTGCCATTCT CCTCTTCGTC TTCCCCGGGA GCCCTCGCCA AGAGACCAGA
CTTGCAAACA CTTATCCGTA ACGTCGTCAA CATCTTCCAA CCCTCCCGTC TCTCCATCAC
TCTTTTCGTC TCCACGCCTC CATCATCCTC TGGCCCTGGC TCGAGCGAAG CAGAAGTCAA
AGCTTGGAAC TCATTCGGAA CGGACCTGTT GGGTAACGAG TTTGTGCGCA AGGACAGGAT
AGGGTACGAG TTTGATGGGT ATGATTTGGT GTTTGCTTGT TTTGAGAAGA AGGGTTGGGT
GGAATCACAG TTGGCGTTGG GTTCGGAGAC CAAGAAGAGT TTATGA
|
|---|
| Protein sequence | MTAELTPSIE EQALTSPGPF EGPEKLLEVW FAPSIEELPS AEEVEGKVAG GLNARPAKEN
GEWQGLRKVP REVWEEMLDI VKCKVLSMVE GDDLDAYLLS ESSLFVAPHV LILKTCGTTL
NLLGLYRIIE IAREYCGFNN VWRCFYSRKS FFFPERQQGP HRDWRDEVQF LDSVFGTAGA
AYTVGPMNRD HWLLYLTTPN SQPILPSDPK PCTLSLPAPS PSSSIPTFSS SSTVTYQDTT
LEILMTHLSP SARAPFFHDS DSFSSPSTTP GHVLGEAISH KLGIDALFSK DETTLDSFGF
DPCGYSANAV IGSGLPVSGK GGKEGGGYFT IHVTPEEGWS YASFECNVPL PFSSSSSPGA
LAKRPDLQTL IRNVVNIFQP SRLSITLFVS TPPSSSGPGS SEAEVKAWNS FGTDLLGNEF
VRKDRIGYEF DGYDLVFACF EKKGWVESQL ALGSETKKSL
|
|---|
| |