| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2058 |
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| Symbol | |
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| ID | 6116321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2524791 |
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| End bp | 2525720 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633561 |
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| Product | adenosylmethionine decarboxylase |
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| Protein accession | YP_001760437 |
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| Protein GI | 170726411 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00535] S-adenosylmethionine decarboxylase proenzyme, eukaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.190241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.282067 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTTTG AAGGGTCAGA AAAAAGAGTT GAGGTGCTAG TATCACCTAC AACTCGCTCC
TTACGTCTTC TCGATGAGCA GTTTTGGAGC GATGTGGTAG CCTGCGCTGA CGCAGAAGTA
CTCTCTAAGA TGGGTAATGA GTGTTGTGAT GCTTACCTGC TTAGTGAGTC TTGCCTGTTC
GTGTGGGATG ATAAGTTTTT GATGTTGACC TGCGGAACGA CAACCTTAGT GGATGCGGTG
ATCTTTTTCG TTGATAAGCT GGGTGAGTCT GCGATAGCCT CAGTGAGTTA CCAACGTAAA
AGTGAATATC TCTCCCATCT GCAAACCAGC AGTTTTGAGG AAGATCTGTC ACGACTCAGA
ACAAAATTGT CCGGTTCGGC ATACCGGGTG GGTCATCTAG ATACTCATCA TCACTATATT
TTCACCTCTG ATCCTCAAAC TCAGCCACTG AAGGTCAAAT CCAACAGTGA ACTTTTGATG
TACCATATCA AGGGCGAGGT GGCTGACTAT CTTAGGAGCG ATGCACAGAG CTGTGAAGGG
ATCCGTGAGT TGCTAGCACT GGAACATCTG TTTCCAGACT TTTGCTTTGA TGACCACCTT
TTTACCCCTT TTGGTTACTC GATAAATGGC TTGTGGGAGG ATAAGTATAT GACGATTCAT
ATCACCCCTC AGGAGCAAAG CTCATACGTG AGCATAGAAA CAAATTTGCA CTTTGAACTC
TATCCGTTCA ATATATTCTC CGCATTGTTG AATAAATTAA ACCCACAAAG CTGGGATGTG
ATTGGATTCA ACCGTCAGGT TATAACGGAT GGATTCCCCC CTTTTGTATC GGTAGCCAGT
TGTGCTCTGC CGATCAATAA CAATGAAACA GTACAGTTCA ACCAGTATCA ACAGCTAAAC
AGTGAGCTGT TGCAGCCTGA ACTGTTGTAA
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| Protein sequence | MFFEGSEKRV EVLVSPTTRS LRLLDEQFWS DVVACADAEV LSKMGNECCD AYLLSESCLF
VWDDKFLMLT CGTTTLVDAV IFFVDKLGES AIASVSYQRK SEYLSHLQTS SFEEDLSRLR
TKLSGSAYRV GHLDTHHHYI FTSDPQTQPL KVKSNSELLM YHIKGEVADY LRSDAQSCEG
IRELLALEHL FPDFCFDDHL FTPFGYSING LWEDKYMTIH ITPQEQSSYV SIETNLHFEL
YPFNIFSALL NKLNPQSWDV IGFNRQVITD GFPPFVSVAS CALPINNNET VQFNQYQQLN
SELLQPELL
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