| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1620 |
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| Symbol | |
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| ID | 4922061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1853026 |
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| End bp | 1853946 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163182 |
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| Product | adenosylmethionine decarboxylase |
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| Protein accession | YP_001093746 |
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| Protein GI | 127512549 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00535] S-adenosylmethionine decarboxylase proenzyme, eukaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.504396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0565321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATTTTG AAGGGGCGGA GAAGCGCTTA TCGCTGACGC TGGCGGCGGG TTGTCCGTCG
CTTAGGGCGT TGGGCGATGC GTATTGGCGC CGCGCCCTGG CCAAGAGTGA TACAGAGATC
CTCTCAAAGC TGAGCAGTGA GCAGTGCGAT GCTTACCTGC TCAGCGAATC TAGCCTGTTT
GTCTGGCACG ATAGTCTGGT GCTGATCACC TGTGGCAACA CACGGCTAAT CGAGACCGTA
CTTTCCCTGG TGGAGTCACT GGGTCGCGAT CAGATTGCCA GCCTGAGTTA TCAGCGTAAG
AGCGAGATCT TACCCGCCTT ACAGACTAGC CGCTTCGAAG AGGATATCGC CCGGCTTGGC
ACCATGCTAA GCGGCGCCGC CTACCGCATA GGCCATTTAG ATGGTCATCA CCATCATATT
TTCTTCTCTG GCAGTAAGGT AAGGCTTAAA CCCGCCCAGA CGGTGCAGAT GTACCATATT
CGCGGTGAGC TGGCCGATTA TCTGCTCAGC GATGGGCAAA CGATTGCGGG GATAGCCAGC
CGGCTTAATT TATCTCAGCT ACTGAGCGGT TTTGATATTG ATGCGCACCT GTTCTCGCCA
CTGGGTTATT CCCTCAACGC CATCAGGGGA GAAGATTATT TTACCTTGCA CATCACCCCG
CAAGAGACGA GCTCCTATGT GAGCCTGGAA ACGAATTTGT CGCTCGGCGC AGGGCTTAAC
GGTATAGTAG GTAAGTTGTT AAACCGCTTA AATCCGGTAA GCTGGGACTT GGCAGGATAT
GAAGCCGAGA CGTTAGCATA CTGCGCCAAA CAGTATAGCC TAGAGGCCCG GGGCGAACTT
GCCTTGGCGG ATGGCCAAGG CCTGTATGTA AAACACTATA AACAGCGCGA TTGTGAGCAA
TTGCTGCCCG TTGCGTTGTG A
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| Protein sequence | MYFEGAEKRL SLTLAAGCPS LRALGDAYWR RALAKSDTEI LSKLSSEQCD AYLLSESSLF
VWHDSLVLIT CGNTRLIETV LSLVESLGRD QIASLSYQRK SEILPALQTS RFEEDIARLG
TMLSGAAYRI GHLDGHHHHI FFSGSKVRLK PAQTVQMYHI RGELADYLLS DGQTIAGIAS
RLNLSQLLSG FDIDAHLFSP LGYSLNAIRG EDYFTLHITP QETSSYVSLE TNLSLGAGLN
GIVGKLLNRL NPVSWDLAGY EAETLAYCAK QYSLEARGEL ALADGQGLYV KHYKQRDCEQ
LLPVAL
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