Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1558 |
Symbol | |
ID | 4252136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1839753 |
End bp | 1840688 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638118172 |
Product | S-adenosylmethionine decarboxylase |
Protein accession | YP_733693 |
Protein GI | 113969900 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00535] S-adenosylmethionine decarboxylase proenzyme, eukaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTTG AAGGCGCGGA AAAAAAGCTT GAGATCAGGC TCACACCCAA GCTGGCATCA CTACGCCTGC GGGAGTATGG CTTTTGGTCG ACGCTGGTGG CCTGTGCGAA TGCAGAAATC CTCTCAACAA GCAGTAATCA TGCCTGCGAT GCCTATCTGC TGAGTGAATC GAGCCTGTTC GTCTGGGACT ATAAAATTCT GATCCTTACC TGCGGCAATA GCACCCTGAT TGAGGCGGCC TGCTACTTTA TTAACGCCTT AGGGGCTGAG CACATCGCCG CGCTCTGCTA TCAGCGCAAG AATGAGTACC AAGCCCAGTT ACAAAGCACC AGCTTTGCTG ACGATATTGC TAAATTGCGA CTCTTGATCC CTGGCGAAGC CTTTCGAATG GGTCATTTGG ATTCACACCA TCACTATGTG TTTTGCGCCG AAAATCAATC GGTTTCCTCA AGCGAAACCA GCCTTGAACT GATGATGTAC CACATCCGTG GCGAGCTTGC CGAGTATCTC AAGTTGCCAA CACAAACCGA GCATGGGATT TATCTGCAGC TTGGCTTGCA ACAACTTTTC GGCGATTTTC AGCTAGATAT GCATTGTTTT CAGCCTGCCG GGTTTTCGTT GAATGCGATA CGAGGTGCTG ACTATTTTAC CTTGCATATC ACACCATCGA TGGGACAAGG GGATAATTCC TATGTCAGTT TTGAGACTAA TCTGGATTTA GCCGTTTATC CCCATCCAGT CGTGGCGCGA TTGCTGGATT TATTCTCCCC AATCAGTTGG GATTTGATTA ATTTTAATCA GCCTATCAAT ACGGCGGGAT TTCCTGCGCA TATTTGCTTA GGTCAAGGTT TAGTGACAAC TGGGTCGGGT AGTCAGATTT CCTTCCGTCA CTATCAGCAG CTTGAACCCC AAATACTGCA ACCTGAGTTT ATCTAG
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Protein sequence | MFFEGAEKKL EIRLTPKLAS LRLREYGFWS TLVACANAEI LSTSSNHACD AYLLSESSLF VWDYKILILT CGNSTLIEAA CYFINALGAE HIAALCYQRK NEYQAQLQST SFADDIAKLR LLIPGEAFRM GHLDSHHHYV FCAENQSVSS SETSLELMMY HIRGELAEYL KLPTQTEHGI YLQLGLQQLF GDFQLDMHCF QPAGFSLNAI RGADYFTLHI TPSMGQGDNS YVSFETNLDL AVYPHPVVAR LLDLFSPISW DLINFNQPIN TAGFPAHICL GQGLVTTGSG SQISFRHYQQ LEPQILQPEF I
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