Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1648 |
Symbol | |
ID | 5079396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1880269 |
End bp | 1881240 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640498797 |
Product | adenosylmethionine decarboxylase |
Protein accession | YP_001183172 |
Protein GI | 146292748 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00535] S-adenosylmethionine decarboxylase proenzyme, eukaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGACG ATCATGAGGT CAAAGAGTTG ATGTTTTTCG AAGGTTCAGA AAAAAAGCTC GAGATTATCG TGACCCCTGT TGCGGCTAAT TTACGCCAAT TGGATTTATC TTTTTGGTCA TCCTTAGTGC GATGCGCCAA TGCGGATATC CTTTCTTCGC TGAAAAGTGA ACACTGTGAT GCTTATTTAC TCAGTGAATC TAGCCTGTTT GTTTGGGATG ATAGAATTTT AATTTTAACC TGTGGTAACA GCATGTTAGT CAATGCTGCT TGCTATTTTA TTGACAAGTT AATGGTCAAT AATATCGCAT TAGTCAGCTA CCAGCGCAAA AATGAATACC ATTCCCACTT GCAAAACAGC ACCTTTGCCG ATGATATTGT TCAATTGCGT CGACTCATCT CTGGCAAGGC GTTTCGTATT GGACATTTAG ACTCACATCA CCATTATTTT TTCTGCTCAG AAGGGCGCTA TCATGCCCAA TCGGACGATA ATACCTTAGA GTTGCTCATG TACCATATTC GGGGCGAGTT TGCCGACTAT CTTAACGGTG AGGTACAAAC CAAATCCGAG ATTTGTGCGT GGCTTGAATT GGATAGATTA TTTCCTGAAT TCACCTTTGA TGCTCATTTA TTTGAGCCAT ATGGCTTTTC AATGAATGGA CTTTGGGAGA AGTATTACAT TACGTTGCAT ATTACGCCCC AGGCTGGACA AGCGTATGGC TGCTCCTATG TGAGTTTTGA AACTAATCTT GATTTGTCAC TATATCCCTA CGCTGTGCTC AAGCATTTGT TAAGCGTGTT TTCCCCTGTG AGTTGGGATG TGATTGGGTT TAACCATCCT ATCGAGACAC AAGTATTTCC TGCACATTTA TGCTTAGGGA GTTGTTCATT AACGACCGAG CAAGGTTATA ACATTCGTTT TAACCACTAT CAGCAGTGTC AGGTTGAAGT ACTGATCCCT GAAGTCATGT AA
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Protein sequence | MSDDHEVKEL MFFEGSEKKL EIIVTPVAAN LRQLDLSFWS SLVRCANADI LSSLKSEHCD AYLLSESSLF VWDDRILILT CGNSMLVNAA CYFIDKLMVN NIALVSYQRK NEYHSHLQNS TFADDIVQLR RLISGKAFRI GHLDSHHHYF FCSEGRYHAQ SDDNTLELLM YHIRGEFADY LNGEVQTKSE ICAWLELDRL FPEFTFDAHL FEPYGFSMNG LWEKYYITLH ITPQAGQAYG CSYVSFETNL DLSLYPYAVL KHLLSVFSPV SWDVIGFNHP IETQVFPAHL CLGSCSLTTE QGYNIRFNHY QQCQVEVLIP EVM
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