More than 300 homologs were found in PanDaTox collection
for query gene Rpal_0719 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_0719  cyclohexanecarboxyl-CoA dehydrogenase  100 
 
 
383 aa  777    Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1034  acyl-CoA dehydrogenase-like  90.08 
 
 
383 aa  699    Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1543  acyl-CoA dehydrogenase-like  90.86 
 
 
383 aa  695    Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0987624  normal 
 
 
-
 
NC_008781  Pnap_2125  acyl-CoA dehydrogenase domain-containing protein  79.84 
 
 
385 aa  639    Polaromonas naphthalenivorans CJ2  Bacteria  hitchhiker  0.00302332  normal  0.0292783 
 
 
-
 
NC_007348  Reut_B3917  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  82.51 
 
 
383 aa  631  1e-180  Ralstonia eutropha JMP134  Bacteria  normal  0.470111  n/a   
 
 
-
 
NC_010524  Lcho_1187  cyclohexanecarboxyl-CoA dehydrogenase  78.24 
 
 
389 aa  625  1e-178  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008786  Veis_4106  acyl-CoA dehydrogenase domain-containing protein  76.96 
 
 
385 aa  603  1.0000000000000001e-171  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.615826 
 
 
-
 
NC_009720  Xaut_0913  acyl-CoA dehydrogenase domain-containing protein  64.18 
 
 
390 aa  494  9.999999999999999e-139  Xanthobacter autotrophicus Py2  Bacteria  normal  0.134959  normal 
 
 
-
 
NC_009719  Plav_1771  acyl-CoA dehydrogenase domain-containing protein  54.57 
 
 
385 aa  432  1e-120  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.426084  normal  0.166679 
 
 
-
 
NC_007950  Bpro_5273  acyl-CoA dehydrogenase-like  53.97 
 
 
388 aa  429  1e-119  Polaromonas sp. JS666  Bacteria  hitchhiker  0.0000000768741  normal 
 
 
-
 
NC_013235  Namu_0878  acyl-CoA dehydrogenase domain protein  51.34 
 
 
384 aa  367  1e-100  Nakamurella multipartita DSM 44233  Bacteria  normal  0.578568  normal 
 
 
-
 
NC_013205  Aaci_1209  acyl-CoA dehydrogenase domain protein  47.52 
 
 
383 aa  358  7e-98  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.197079  n/a   
 
 
-
 
NC_013172  Bfae_04670  acyl-CoA dehydrogenase  52.09 
 
 
380 aa  352  5e-96  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4298  acyl-CoA dehydrogenase domain-containing protein  45.95 
 
 
381 aa  313  1.9999999999999998e-84  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  35.98 
 
 
380 aa  238  1e-61  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  36.24 
 
 
380 aa  233  5e-60  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001547  branched-chain acyl-CoA dehydrogenase  38.2 
 
 
384 aa  230  3e-59  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_1179  acyl-CoA dehydrogenase-like protein  35.64 
 
 
392 aa  228  1e-58  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0762  acyl-CoA dehydrogenase domain-containing protein  39.78 
 
 
381 aa  226  7e-58  Meiothermus ruber DSM 1279  Bacteria  normal  0.927466  normal  0.783766 
 
 
-
 
NC_007954  Sden_1941  butyryl-CoA dehydrogenase  36.44 
 
 
385 aa  225  9e-58  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2695  acyl-CoA dehydrogenase domain protein  36.2 
 
 
382 aa  224  2e-57  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2769  acyl-CoA dehydrogenase domain-containing protein  37.5 
 
 
385 aa  224  2e-57  Shewanella sp. ANA-3  Bacteria  normal  normal  0.329604 
 
 
-
 
NC_011663  Sbal223_2854  acyl-CoA dehydrogenase domain protein  36.97 
 
 
385 aa  224  3e-57  Shewanella baltica OS223  Bacteria  normal  0.715109  hitchhiker  0.0000000460252 
 
 
-
 
NC_009052  Sbal_1497  acyl-CoA dehydrogenase domain-containing protein  36.97 
 
 
385 aa  224  3e-57  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1399  acyl-CoA dehydrogenase domain-containing protein  36.97 
 
 
385 aa  223  3e-57  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1777  putative acyl-CoA dehydrogenase  38.18 
 
 
383 aa  223  4e-57  Thermobifida fusca YX  Bacteria  normal  0.0345355  n/a   
 
 
-
 
NC_008228  Patl_0949  acyl-CoA dehydrogenase-like  36.7 
 
 
385 aa  223  4e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0416018  n/a   
 
 
-
 
NC_003910  CPS_0658  acyl-CoA dehydrogenase  35.81 
 
 
388 aa  223  6e-57  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0298  acyl-CoA dehydrogenase domain protein  39.25 
 
 
381 aa  223  6e-57  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_05484  acyl-CoA dehydrogenase  37.4 
 
 
384 aa  222  9.999999999999999e-57  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_2595  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
385 aa  221  9.999999999999999e-57  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000133331 
 
 
-
 
NC_008322  Shewmr7_2662  acyl-CoA dehydrogenase domain-containing protein  37.23 
 
 
385 aa  221  9.999999999999999e-57  Shewanella sp. MR-7  Bacteria  normal  0.553599  normal 
 
 
-
 
NC_008345  Sfri_1340  butyryl-CoA dehydrogenase  36.62 
 
 
385 aa  221  9.999999999999999e-57  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.92296  n/a   
 
 
-
 
NC_004347  SO_1679  acyl-CoA dehydrogenase family protein  37.23 
 
 
385 aa  221  1.9999999999999999e-56  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_1527  acyl-CoA dehydrogenase domain-containing protein  36.7 
 
 
385 aa  221  1.9999999999999999e-56  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1491  acyl-CoA dehydrogenase domain-containing protein  36.7 
 
 
385 aa  221  1.9999999999999999e-56  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0626  acyl-CoA dehydrogenase domain-containing protein  35.71 
 
 
386 aa  220  3.9999999999999997e-56  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000265202  n/a   
 
 
-
 
NC_013457  VEA_000373  branched-chain acyl-CoA dehydrogenase  36.48 
 
 
384 aa  220  3.9999999999999997e-56  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4293  acyl-CoA dehydrogenase domain-containing protein  35.32 
 
 
383 aa  220  3.9999999999999997e-56  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2781  acyl-CoA dehydrogenase domain-containing protein  35.37 
 
 
385 aa  219  6e-56  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2355  acyl-CoA dehydrogenase domain-containing protein  35.08 
 
 
381 aa  216  4e-55  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.774843  n/a   
 
 
-
 
NC_012854  Rleg_6504  acyl-CoA dehydrogenase domain protein  37.29 
 
 
375 aa  216  5e-55  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.285028  normal  0.547313 
 
 
-
 
NC_007969  Pcryo_1516  butyryl-CoA dehydrogenase  34.22 
 
 
386 aa  216  5e-55  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2863  acyl-CoA dehydrogenase domain protein  36.27 
 
 
380 aa  216  5e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1377  butyryl-CoA dehydrogenase  36.17 
 
 
385 aa  216  5e-55  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0267981 
 
 
-
 
NC_011368  Rleg2_4384  acyl-CoA dehydrogenase domain protein  37.57 
 
 
375 aa  216  7e-55  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.17615  normal 
 
 
-
 
NC_009719  Plav_2898  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
379 aa  215  9.999999999999999e-55  Parvibaculum lavamentivorans DS-1  Bacteria  normal  hitchhiker  0.000249127 
 
 
-
 
NC_008025  Dgeo_0736  acyl-CoA dehydrogenase-like protein  35.48 
 
 
379 aa  215  9.999999999999999e-55  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.763418 
 
 
-
 
NC_009674  Bcer98_1802  acyl-CoA dehydrogenase domain-containing protein  34.82 
 
 
381 aa  215  9.999999999999999e-55  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2327  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  214  1.9999999999999998e-54  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5139  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
379 aa  214  1.9999999999999998e-54  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2560  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  214  1.9999999999999998e-54  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.1486499999999994e-20 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  36.07 
 
 
379 aa  213  2.9999999999999995e-54  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_011725  BCB4264_A2511  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  213  2.9999999999999995e-54  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B2812  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  213  2.9999999999999995e-54  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000163693 
 
 
-
 
NC_007530  GBAA_2547  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  214  2.9999999999999995e-54  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  35.81 
 
 
379 aa  213  2.9999999999999995e-54  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_013525  Tter_0362  acyl-CoA dehydrogenase domain protein  34.82 
 
 
406 aa  214  2.9999999999999995e-54  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_2548  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  213  3.9999999999999995e-54  Bacillus cereus ATCC 10987  Bacteria  normal  0.438014  n/a   
 
 
-
 
NC_005957  BT9727_5025  butyryl-CoA dehydrogenase (short-chain acyl-CoA dehydrogenase)  36.07 
 
 
379 aa  213  3.9999999999999995e-54  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK2285  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  213  3.9999999999999995e-54  Bacillus cereus E33L  Bacteria  normal  0.769883  n/a   
 
 
-
 
NC_007204  Psyc_0901  putative acyl-CoA dehydrogenase  33.95 
 
 
386 aa  213  3.9999999999999995e-54  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A2603  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  213  3.9999999999999995e-54  Bacillus cereus AH187  Bacteria  normal  0.608519  n/a   
 
 
-
 
NC_009092  Shew_1669  butyryl-CoA dehydrogenase  35.37 
 
 
385 aa  213  3.9999999999999995e-54  Shewanella loihica PV-4  Bacteria  normal  0.260436  hitchhiker  0.00156032 
 
 
-
 
NC_005945  BAS2369  acyl-CoA dehydrogenase  34.55 
 
 
381 aa  213  4.9999999999999996e-54  Bacillus anthracis str. Sterne  Bacteria  normal  0.73982  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  35.81 
 
 
379 aa  213  4.9999999999999996e-54  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  35.81 
 
 
379 aa  213  4.9999999999999996e-54  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  35.81 
 
 
379 aa  212  7e-54  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  36.07 
 
 
379 aa  212  7e-54  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_008740  Maqu_2132  butyryl-CoA dehydrogenase  36.97 
 
 
388 aa  211  1e-53  Marinobacter aquaeolei VT8  Bacteria  normal  0.627987  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  35.54 
 
 
379 aa  211  2e-53  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0733  acyl-CoA dehydrogenase domain protein  37.36 
 
 
377 aa  211  2e-53  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2136  acyl-CoA dehydrogenase domain-containing protein  36.68 
 
 
380 aa  211  2e-53  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.281355 
 
 
-
 
NC_008782  Ajs_2007  acyl-CoA dehydrogenase domain-containing protein  35.64 
 
 
388 aa  211  2e-53  Acidovorax sp. JS42  Bacteria  normal  0.510402  normal  0.124271 
 
 
-
 
NC_011992  Dtpsy_1811  acyl-CoA dehydrogenase domain protein  35.64 
 
 
388 aa  211  2e-53  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1475  butyryl-CoA dehydrogenase  34.57 
 
 
385 aa  210  3e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.00937307 
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  35.28 
 
 
379 aa  210  4e-53  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1375  acyl-CoA dehydrogenase domain-containing protein  36.97 
 
 
387 aa  210  4e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.178062  normal  0.0980928 
 
 
-
 
NC_008463  PA14_54630  acyl-CoA dehydrogenase  36.97 
 
 
387 aa  210  4e-53  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00169112 
 
 
-
 
NC_009441  Fjoh_1932  acyl-CoA dehydrogenase domain-containing protein  34.47 
 
 
380 aa  209  5e-53  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_3200  acyl-CoA dehydrogenase domain-containing protein  34.84 
 
 
385 aa  209  5e-53  Shewanella woodyi ATCC 51908  Bacteria  normal  0.393512  hitchhiker  0.00650034 
 
 
-
 
NC_010718  Nther_1881  butyryl-CoA dehydrogenase  33.6 
 
 
379 aa  209  8e-53  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.593492  normal  0.222475 
 
 
-
 
NC_009675  Anae109_2163  acyl-CoA dehydrogenase domain-containing protein  36.94 
 
 
389 aa  208  1e-52  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.820192  normal  0.287496 
 
 
-
 
NC_010681  Bphyt_0459  acyl-CoA dehydrogenase domain protein  37.33 
 
 
376 aa  208  1e-52  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.672922 
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  35.81 
 
 
380 aa  209  1e-52  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_3862  acyl-CoA dehydrogenase domain-containing protein  36.57 
 
 
379 aa  208  2e-52  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3106  acyl-CoA dehydrogenase domain-containing protein  36.84 
 
 
375 aa  207  3e-52  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.332334  n/a   
 
 
-
 
NC_012793  GWCH70_3342  acyl-CoA dehydrogenase domain protein  32.63 
 
 
379 aa  207  3e-52  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_0081  acyl-CoA dehydrogenase domain protein  34.41 
 
 
642 aa  207  3e-52  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3863  acyl-CoA dehydrogenase domain-containing protein  34.04 
 
 
376 aa  207  3e-52  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  33.96 
 
 
381 aa  206  4e-52  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010184  BcerKBAB4_5140  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
376 aa  206  4e-52  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2137  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
382 aa  206  6e-52  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.545271  normal  0.220827 
 
 
-
 
NC_010002  Daci_3693  acyl-CoA dehydrogenase domain-containing protein  35.7 
 
 
388 aa  206  6e-52  Delftia acidovorans SPH-1  Bacteria  normal  0.625354  normal  0.0697869 
 
 
-
 
NC_008687  Pden_2906  acyl-CoA dehydrogenase domain-containing protein  36.19 
 
 
375 aa  206  6e-52  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5473  acyl-CoA dehydrogenase  34.75 
 
 
376 aa  205  1e-51  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5042  short-chain acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase  34.3 
 
 
376 aa  205  1e-51  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0397  acyl-CoA dehydrogenase domain protein  33.59 
 
 
379 aa  205  1e-51  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.362138 
 
 
-
 
NC_011658  BCAH187_A5520  acyl-CoA dehydrogenase  34.75 
 
 
381 aa  205  1e-51  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0402  acyl-CoA dehydrogenase domain-containing protein  35 
 
 
380 aa  205  1e-51  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
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