| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0719 |
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| Symbol | |
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| ID | 6408372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 754488 |
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| End bp | 755639 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710634 |
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| Product | cyclohexanecarboxyl-CoA dehydrogenase |
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| Protein accession | YP_001989754 |
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| Protein GI | 192289149 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03207] cyclohexanecarboxyl-CoA dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAT ATTTGAACGA AGACCTCGTG GCGCTGGCTG CGCAGGCGCG GCGGTTCGCT
GCTGACCGGA TCGCGCCGGG ATATCAGGAG CGAGACCGGA CGCGGGTGCT CGACCGCGGC
TTGATGAAGG CCATGGGCGA GATGGGCTTC ATCGCTCCGG AATTGCCGGA AGCGTGCGGG
GGGCTCGGCA TGGGCAGCCT CGCAGCCGGC GTGATCCACG AAGAGATCGC GCGCGCCGAC
CTCAGCATGT CCTACGTCAA TCTGCTCGCT TCGCTGAACG GCCAGATCCT GTCGCAGCAC
GGGCGACCCG AGATCGTGCA GCCGTGGCTG GCGAAGCTGA TCGGCGGCGA GGCACTGTTC
GCGATCGCGT TGACCGAGCC CCGGGGCGGC TCGGATGCGG CCAACCTGCG TCTGCGGATC
GAGCGCGACG GCGACGACTA CATCGTCAAC GGCGAGAAGA CTTCGATCTC CGCAGCCGAT
CAGGCGGATG CGGCGGTAGT GTTCGGCCGC ACCGGCTCGA TCGACGCCGG CGCACATGGC
GTCACCGCGC TGCTGATTCC GATGGACCTG CCCGGCATCA CCCGCAACAG GTTCGACTGC
CACGGCCAGC GTGCGATCGG CCGCGGCTCG CTGTTTTTCG AGAACGTTCG CGTCCCGGCC
GCGCATCGGC TCGGCGACGA GAACAAAGGT TTCGTCCAGG TGATGCAGGG CTTCGATTTC
TCCCGCGCGC TGATCGGCCT GCAGGTGCTC GCCGTCGCGC GCGTCGCACT CGAGGAGACC
TGGGCGCATG TCGCGGAGCG GCAGGCGTTC GGCAAACCGC TGTCGGCGTT TCAGGGCGTG
TCGCATCCGC TCGCTGACCT CGACACCCAG GTCGAGGCCG CGCGTCTGCT GTGCCTGCAG
GCGCTTTGGC TAAAGGACCA CGGCGCCCCG CACAGCGCCG AGGCCGCGAT GTGCAAATGG
TGGGCGCCGA AGCTCGCTTA CGACGTGATC CATCAATGCC TGCTGATGCA CGGCCACGGT
GGCTACGACC GCGGCCCGAT GGAGCAGCGG CTGCGCGACG TGCTCGGCTT CCAGATCGGC
GACGGCACCG CGCAAATCAT GAAGACGATC ATCGCGCGCC ACCGGGCCGG CCGCGCCGCA
GTGCCGGCCT GA
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| Protein sequence | MNPYLNEDLV ALAAQARRFA ADRIAPGYQE RDRTRVLDRG LMKAMGEMGF IAPELPEACG
GLGMGSLAAG VIHEEIARAD LSMSYVNLLA SLNGQILSQH GRPEIVQPWL AKLIGGEALF
AIALTEPRGG SDAANLRLRI ERDGDDYIVN GEKTSISAAD QADAAVVFGR TGSIDAGAHG
VTALLIPMDL PGITRNRFDC HGQRAIGRGS LFFENVRVPA AHRLGDENKG FVQVMQGFDF
SRALIGLQVL AVARVALEET WAHVAERQAF GKPLSAFQGV SHPLADLDTQ VEAARLLCLQ
ALWLKDHGAP HSAEAAMCKW WAPKLAYDVI HQCLLMHGHG GYDRGPMEQR LRDVLGFQIG
DGTAQIMKTI IARHRAGRAA VPA
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