16 homologs were found in PanDaTox collection
for query gene Pden_0944 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008686  Pden_0944  TetR family transcriptional regulator  100 
 
 		 123 aa  248  2e-65  Paracoccus denitrificans PD1222  Bacteria  normal  0.335834  normal  1 
 
 
-
 
NC_008686  Pden_1196  TetR family transcriptional regulator  99.19 
 
 		 214 aa  246  1e-64  Paracoccus denitrificans PD1222  Bacteria  normal  0.228936  normal  1 
 
 
-
 
NC_007494  RSP_3680  TetR family transcriptional regulator  75.21 
 
 		 207 aa  166  7e-41  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3415  TetR family transcriptional regulator  75.21 
 
 		 207 aa  166  7e-41  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.573909  normal  1 
 
 
-
 
NC_009429  Rsph17025_3310  hypothetical protein  71.79 
 
 		 212 aa  162  1.0000000000000001e-39  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.106528 
 
 
-
 
NC_009620  Smed_4888  TetR family transcriptional regulator  58.47 
 
 		 209 aa  134  3.0000000000000003e-31  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012848  Rleg_4824  transcriptional regulator, TetR family  54.47 
 
 		 209 aa  130  7.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.870424 
 
 
-
 
NC_011368  Rleg2_4912  transcriptional regulator, TetR family  52.85 
 
 		 209 aa  128  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.095587  normal  1 
 
 
-
 
NC_002947  PP_4754  TetR family transcriptional regulator  50 
 
 		 215 aa  115  1.9999999999999998e-25  Pseudomonas putida KT2440  Bacteria  hitchhiker  0.000397464  hitchhiker  0.00227458 
 
 
-
 
NC_008043  TM1040_3138  TetR family transcriptional regulator  41.74 
 
 		 207 aa  106  8.000000000000001e-23  Ruegeria sp. TM1040  Bacteria  normal  0.293904  normal  1 
 
 
-
 
NC_007802  Jann_1479  TetR family transcriptional regulator  36.29 
 
 		 231 aa  86.7  9e-17  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008043  TM1040_3681  TetR family transcriptional regulator  38.39 
 
 		 224 aa  82  0.000000000000002  Ruegeria sp. TM1040  Bacteria  normal  0.966495  normal  0.60312 
 
 
-
 
NC_007802  Jann_1527  TetR family transcriptional regulator  33.91 
 
 		 204 aa  70.9  0.000000000005  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.093957 
 
 
-
 
NC_009511  Swit_0946  TetR family transcriptional regulator  31.31 
 
 		 206 aa  47.8  0.00005  Sphingomonas wittichii RW1  Bacteria  normal  0.826877  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_2407  TetR family transcriptional regulator  27.47 
 
 		 177 aa  43.5  0.001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0993242  n/a   
 
 
-
 
NC_008726  Mvan_1901  TetR family transcriptional regulator  39.34 
 
 		 187 aa  41.6  0.004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
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