| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1479 |
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| Symbol | |
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| ID | 3933926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 1448007 |
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| End bp | 1448702 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637903829 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_509421 |
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| Protein GI | 89053970 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTG ATACCCCCCT CCTCCACCGC GACGATCCCG CCAAGGACCC CCTGGTCGGG
CACATCAAAG TCACGCGCGA GGATTGGGTG AACACCGCGC GTGATGTCCT GGTCAATTCG
GGCGTGGCCC AAGTCAAAAT CGCGACCCTC GCTGGGCGTC TCGACGTTTC AAGGTCCTCA
TTTTACTGGT ATTTTCAAAA TCGTGATGAG CTTCTGTCTG CTTTGTTGCA AGATTGGCAA
ACTCGCAACA CACGCTCGAT CACCGACCAT TGTGCGCGGC CGTCCCGCTC CATCGCGCAG
GCGCTTTGCA ACTTCTTCCG ATGCTTTGTC GACACCCGCC AGTTCGATCC GGGCCTTGAT
TTCGCGATCC GGGAATGGGC GCGACGGAAC GAGGACGTCC GTGATGCCAT TGATGCGGCG
GATACTGCCC GCCTGGACGC GGTTCGCGCC ATGTTCGATC GCCATGACTA CGCGCCAGAG
GACGCCGACG CCCGCGCTCG CATCCTATAC TTCATGCAGT TGGGATACCA CGCCCTGGAC
CTGCGCGAAG ACATGGAAAC GCGCATGTCC CGGGTATCTG CCTACGTCTT GGGCTTCACC
GGAATATCTC CACAAAACAC TGATATTGAA GAATTTTTAG ATTACGTGGG CGATCTTGCC
CCGCATGGGA TCAGTGGGGC GTCTCAACGG GCGTGA
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| Protein sequence | MMRDTPLLHR DDPAKDPLVG HIKVTREDWV NTARDVLVNS GVAQVKIATL AGRLDVSRSS
FYWYFQNRDE LLSALLQDWQ TRNTRSITDH CARPSRSIAQ ALCNFFRCFV DTRQFDPGLD
FAIREWARRN EDVRDAIDAA DTARLDAVRA MFDRHDYAPE DADARARILY FMQLGYHALD
LREDMETRMS RVSAYVLGFT GISPQNTDIE EFLDYVGDLA PHGISGASQR A
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