| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3138 |
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| Symbol | |
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| ID | 4075010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 117100 |
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| End bp | 117723 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004641 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_611374 |
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| Protein GI | 99078116 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.293904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAC CCACCTCCCC TCGCCCGCGC GGCTCGCGCG ACCTCTGGCT CGATGCCGCG
CTTGATCTTT TGGTCTCAAG TGGGATCGAC GCGGTGAAAA TCATGCCGCT GGCCCGCGCC
GTGGATCAAA CCCGCACCGG GTTTTACTGG TATTTCAAGG ATATCGGCGC ATTGCACGAG
GCAATGATCG ACACTTGGGA AGCGCGCAAC ACCGGCCAGA TCCAGGCCCG CTGCGAGGCC
CCGGCCCAGA GCATCGGCGC AGCGCTGTTC AACCTGATGG ATTGCTGGCT CAACCCTGCG
CTTTTTGATG CCCGCCTGGA TCTGGCTATC CGCAACTGGG CGCGCAATGA CACCAGACTC
GCCGCGCGGC TGGAAAGCGC CGACAACGCC CGCATAAAAT CCGTGCGCGA CATGTTCCTG
CGCTATGGCT ACAGCAAAGA GCAGGCCGAT GTCCGAAGTC TCACCACGAT TTACACACAG
GTGGGCTATA TCTCGATGGA GGTCGAAGAA GATCCCCTGC AGCGCCTCAA CCGCGTGCCG
CATTATGTGG AGATGTTCTC GGGCCAGCCT CCCACAGAGG AAGAGATCGC CGAATTCATG
GGGCGCCACC AAACGCCGCA ATAA
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| Protein sequence | MSKPTSPRPR GSRDLWLDAA LDLLVSSGID AVKIMPLARA VDQTRTGFYW YFKDIGALHE
AMIDTWEARN TGQIQARCEA PAQSIGAALF NLMDCWLNPA LFDARLDLAI RNWARNDTRL
AARLESADNA RIKSVRDMFL RYGYSKEQAD VRSLTTIYTQ VGYISMEVEE DPLQRLNRVP
HYVEMFSGQP PTEEEIAEFM GRHQTPQ
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