10 homologs were found in PanDaTox collection
for query gene Patl_2819 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_2819  porin family outer membrane protein  100 
 
 		 194 aa  383  1e-105  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.504294  n/a   
 
 
-
 
NC_011138  MADE_03114  Outer membrane protein, porin family  39.69 
 
 		 192 aa  142  2e-33  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
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NC_008228  Patl_0386  porin family outer membrane protein  37.7 
 
 		 186 aa  124  1e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0493197  n/a   
 
 
-
 
NC_007954  Sden_1588  hypothetical protein  36 
 
 		 198 aa  104  1e-21  Shewanella denitrificans OS217  Bacteria  normal  0.444233  n/a   
 
 
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NC_011138  MADE_03976  outer membrane protein, porin family  29.78 
 
 		 184 aa  89  4e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
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NC_008228  Patl_0813  porin family outer membrane protein  30.39 
 
 		 101 aa  60.5  0.00000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
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NC_007514  Cag_0544  hypothetical protein  28.42 
 
 		 188 aa  60.5  0.00000002  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.178626  n/a   
 
 
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NC_007514  Cag_0546  hypothetical protein  27.04 
 
 		 188 aa  50.8  0.00001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.61782  n/a   
 
 
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NC_011071  Smal_0144  hypothetical protein  28.31 
 
 		 191 aa  46.6  0.0002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
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NC_010717  PXO_03968  hypothetical protein  25 
 
 		 194 aa  42.7  0.003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
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