Gene Patl_0386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0386 
Symbol 
ID4173476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp442111 
End bp442671 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content42% 
IMG OID638053384 
Productporin family outer membrane protein 
Protein accessionYP_659970 
Protein GI109896715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0493197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTT CAAAAATTGC TTTATTAGCA GCGACCGTTA TTTCCGTTCC TACTGCTTAC 
GCAGCCTCTC CTGACTTCAA CTATGTTGAA GGCGGTTATG CAAAGATTGA TGTAGACAAC 
AGCGACTACG AGCCAGATGG CTTCAAAGTT TCTGGTTCTG CATTGGTAGG TAAAAATGTT 
TTTGTGAATG GCTCGTACAC AGACACCTCT GATGAAATCA ACAACAGTGA TATTGACTTT 
AACCAGCTTA GTTTAGGTAT TGGTTATCGT ATGGCAGCAT CAAGTAATAC GGATGTATAC 
GGTGTTGTCA GTTATGAAGA AGCTGAACTA GAAGATTATG ATGAAAATGG ATACGGCTTA 
ACAGCGGGCA TTCGCTCACG TGTAACACCA AATATCGAAT TAGATGGCGG CGTATCCTAT 
ATCGATTTAG ACGACGATGA TGATACGTAC CTTAATTTAG GCGCCAGTTA CTACTTCACT 
CCCGAAGCAG CGGTGAGCGT GTCTTATCGT ACGTCCGATG ACAACGATAT TATGGGTGTC 
TCTGCTCGTT ATTCATTCTA A
 
Protein sequence
MKASKIALLA ATVISVPTAY AASPDFNYVE GGYAKIDVDN SDYEPDGFKV SGSALVGKNV 
FVNGSYTDTS DEINNSDIDF NQLSLGIGYR MAASSNTDVY GVVSYEEAEL EDYDENGYGL 
TAGIRSRVTP NIELDGGVSY IDLDDDDDTY LNLGASYYFT PEAAVSVSYR TSDDNDIMGV 
SARYSF