| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2819 |
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| Symbol | |
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| ID | 4174579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3421492 |
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| End bp | 3422076 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055836 |
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| Product | porin family outer membrane protein |
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| Protein accession | YP_662384 |
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| Protein GI | 109899129 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.504294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCAA AAGCGGTTTT ACTCTTTTTC GCACTATTCT CAACTAGTTC AGTCATTGCA
GCTTCGCCAA ATTGGGATTA CGTTCAAGGC GGATATTATA CTGCCGATGT GTCTGATTTC
GACGGCTTTG ATCCTACAGG GTTTGGTATC GGTGGCGCTA AATCGCTTGG GAATAATGTA
TTTGTCAGAG GCAGCTACAG CATGCTCAGT GATGACTTAT CTGGCGGAGA TGTGGATTTT
GATCAGGGTT CAGCAGAACT AGGCTATCGT TACAAAATGT CTAGCTCTAC CGATTTATAC
GGTACGGTCG CGTACCATTA TGCTGAAATT AGCGCGAACG GTTCTGGAGG CAGTGCAAGT
ACAGATACAG ATGGTTTTGG CGCTACCATA GGCATTCGTT CAATGGTAAC CAATAAAATT
GACTTAGAGG CAGCGGCAGG CTTTCTCCGT TTCGACGGTG ACAGTGAAGC AATCACCTCG
ATAGCGGCAA ACTATTTCTT TCACTCGAAC GTTTCTGTTG GGATAAAATT CACCAAAATT
TCAGATGTAA GCACGTTAGG CGCTGTTCTT CGATATTCGT TCTAA
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| Protein sequence | MKPKAVLLFF ALFSTSSVIA ASPNWDYVQG GYYTADVSDF DGFDPTGFGI GGAKSLGNNV
FVRGSYSMLS DDLSGGDVDF DQGSAELGYR YKMSSSTDLY GTVAYHYAEI SANGSGGSAS
TDTDGFGATI GIRSMVTNKI DLEAAAGFLR FDGDSEAITS IAANYFFHSN VSVGIKFTKI
SDVSTLGAVL RYSF
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