10 homologs were found in PanDaTox collection
for query gene Patl_0813 on replicon NC_008228
Organism: Pseudoalteromonas atlantica T6c



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008228  Patl_0813  porin family outer membrane protein  100 
 
 		 101 aa  198  1.9999999999999998e-50  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03114  Outer membrane protein, porin family  60.4 
 
 		 192 aa  135  2e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
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NC_008228  Patl_0386  porin family outer membrane protein  44.55 
 
 		 186 aa  81.6  0.000000000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0493197  n/a   
 
 
-
 
NC_011138  MADE_03976  outer membrane protein, porin family  47.22 
 
 		 184 aa  80.1  0.000000000000009  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
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NC_007954  Sden_1588  hypothetical protein  41.18 
 
 		 198 aa  71.6  0.000000000003  Shewanella denitrificans OS217  Bacteria  normal  0.444233  n/a   
 
 
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NC_008228  Patl_2819  porin family outer membrane protein  30.39 
 
 		 194 aa  60.5  0.000000007  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.504294  n/a   
 
 
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NC_009654  Mmwyl1_1559  hypothetical protein  36.36 
 
 		 181 aa  49.3  0.00002  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00684601  unclonable  0.00000000000182676 
 
 
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NC_007514  Cag_0546  hypothetical protein  33.78 
 
 		 188 aa  43.1  0.001  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.61782  n/a   
 
 
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NC_008789  Hhal_1809  hypothetical protein  29.81 
 
 		 197 aa  43.1  0.001  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
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NC_007514  Cag_0544  hypothetical protein  34.25 
 
 		 188 aa  42  0.003  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.178626  n/a   
 
 
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