Gene MADE_03976 details

Gene Information

• Locus tag: MADE_03976
• ID: 6777710
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: +
• Start bp: 4285711
• End bp: 4286265
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642757427
• Product: outer membrane protein, porin family
• Protein accession: YP_002128260
• Protein GI: 196158771

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAAAA CAATCACACT TATCACGGCA GCACTTGCTG CAGCAACACT TCCTCTTTCA 
GCAATGGCTG ACAAGCCTGA CTGGCGTTAC GTAGAAGGTG GTTACACCAA AATGGACTTT 
GACAACAACG AGTCTTTTGA GCCAGACGGC CTAACGGTTA ATGGTAAATA TCTTTTAAAC 
AGCAACTGGT ACCTAAACGG TGAGTACAGT TTTTTCGAAG AAGGTAACTT TGACTTCGAC 
ATGCTTACGC TAGGTGCTGG CTATCGTTTA CCCGTAAACG CAACAACTGA CGCCTACTTT 
GGTGCTAACC TAGAGCGTAT AGACGGTGAC GTAAATGACG AAACGGGCTA TAGCATTAAT 
GCTGGCCTAC GCTCAATGAT TACAGAGCAA GTTGAGCTAG CCGGTGAAGT GGGTTACTAC 
GACGTAGATG ATGGAGAAGC ATCATTTAGA GTAGGTGCAA ATTATTACAT TACGCCGCAA 
TGGGCTGTGG GAGCTAACTA CAGAGTGATT GATGACCTAG ACATTATGCA GGTTACTGCA 
CGATACGCGT TTTAA 

 

Protein sequence

MRKTITLITA ALAAATLPLS AMADKPDWRY VEGGYTKMDF DNNESFEPDG LTVNGKYLLN 
SNWYLNGEYS FFEEGNFDFD MLTLGAGYRL PVNATTDAYF GANLERIDGD VNDETGYSIN 
AGLRSMITEQ VELAGEVGYY DVDDGEASFR VGANYYITPQ WAVGANYRVI DDLDIMQVTA 
RYAF