16 homologs were found in PanDaTox collection
for query gene PC1_0827 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_0827  transcriptional regulator, CadC  100 
 
 		 261 aa  531  1e-150  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
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NC_013421  Pecwa_1060  putative transcriptional regulator, CadC  69.47 
 
 		 257 aa  336  2.9999999999999997e-91  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_009832  Spro_4134  transcriptional regulator, CadC  28.7 
 
 		 267 aa  84.3  0.000000000000002  Serratia proteamaculans 568  Bacteria  normal  0.907655  normal  1 
 
 
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NC_009832  Spro_4728  transcriptional regulator, CadC  35.85 
 
 		 256 aa  82  0.000000000000009  Serratia proteamaculans 568  Bacteria  decreased coverage  0.000608596  normal  1 
 
 
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NC_009832  Spro_4726  transcriptional regulator, CadC  32.04 
 
 		 255 aa  79.3  0.00000000000005  Serratia proteamaculans 568  Bacteria  normal  0.0273728  normal  1 
 
 
-
 
NC_009832  Spro_1500  transcriptional regulator, CadC  27.7 
 
 		 279 aa  67.8  0.0000000002  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
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NC_011080  SNSL254_A4037  transcriptional regulator C  31.82 
 
 		 254 aa  51.6  0.00001  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.975119  normal  0.932239 
 
 
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NC_011083  SeHA_C4087  transcriptional regulator C  31.82 
 
 		 254 aa  51.6  0.00001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
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NC_011149  SeAg_B3983  transcriptional regulatory protein, C  31.82 
 
 		 254 aa  51.6  0.00001  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
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NC_011094  SeSA_A3964  transcriptional regulatory protein C  30.91 
 
 		 254 aa  50.4  0.00003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
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NC_011353  ECH74115_1270  putative transcriptional regulator  28.7 
 
 		 270 aa  50.1  0.00004  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.474734 
 
 
-
 
NC_011080  SNSL254_A0019  hypothetical protein  25.2 
 
 		 147 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.644907 
 
 
-
 
NC_011083  SeHA_C0019  hypothetical protein  25.2 
 
 		 147 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.975768  normal  1 
 
 
-
 
NC_011094  SeSA_A0019  hypothetical protein  25.2 
 
 		 147 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.635001 
 
 
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NC_011149  SeAg_B0019  hypothetical protein  25.2 
 
 		 147 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A0018  hypothetical protein  25.2 
 
 		 147 aa  44.7  0.002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.354059  normal  1 
 
 
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