Gene SeSA_A3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3964 
Symbol 
ID6516017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3838761 
End bp3839525 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content47% 
IMG OID642748936 
Producttranscriptional regulatory protein C 
Protein accessionYP_002116698 
Protein GI194737607 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATGGA TAATTAACGA TAATATTGAA TTTAATCCAG AAATGAATCG CCTGGCGTCA 
TTATCGAGGC CAGATCTCAA CATTATTCTG ACAACGCCCG CCAGCCGTTG CTTGCGCCTT 
CTGCTGGAAA ACGCCCCCTC TGTCGTCTCA CAACAAACAT TCTTTCAAAA AGTGTGGGAA 
GAAGACGGCA TGGTGGTGTC GGCAAATACG CTTTATCAGA ATATCTCCAT TATTCGCCGC 
GGATTACGTA CCGTTGGCGA AAATGAAGAT ACGCTGATAA TCACGGTTCC GCGTAGAGGC 
TTTCAGATTG AGCCTGGCGC GAGCATCATG ACCATCCGCA AAGACTTCGC TCAGACAATA 
GAAAAAAAGG GTGAGACGCC GCCGCGTATG TCAGGGCGTT GGTTTAAACA TTATGTACCT 
GTACTTTGGA TGACCGGGAC ATTTGCTGTC GGTATTTTGC TTGGCACTAT AAGCTGGCAA 
ACCGTTCCCG ATAAGGATTT TTATGATCGC TACACGCTGG TTGAAACAAC GCAGGGTTGT 
CATTTTTTCT CGCGGAATGA AGATATCGAA AGCGGTAGCC GCTTTGCAGG CTATAAGTCA 
ATGATTCTAA AAACCGGTAT GGATTGTCAG AAATACCCAT GGGTCTATTT TCCTTCCAGC 
AGTCGCACCC CAGCGGTTAC GGCATTGATT TGTCAGCAAC CGTATAAAAC GCGCGGCGAT 
ACAGGCTGCG TGACGCTTTT TTTCCGCGGG GTGACACATG GGTAA
 
Protein sequence
MLWIINDNIE FNPEMNRLAS LSRPDLNIIL TTPASRCLRL LLENAPSVVS QQTFFQKVWE 
EDGMVVSANT LYQNISIIRR GLRTVGENED TLIITVPRRG FQIEPGASIM TIRKDFAQTI 
EKKGETPPRM SGRWFKHYVP VLWMTGTFAV GILLGTISWQ TVPDKDFYDR YTLVETTQGC 
HFFSRNEDIE SGSRFAGYKS MILKTGMDCQ KYPWVYFPSS SRTPAVTALI CQQPYKTRGD 
TGCVTLFFRG VTHG