Gene Spro_4726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4726 
Symbol 
ID5603072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5221986 
End bp5222753 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content40% 
IMG OID640940292 
Producttranscriptional regulator, CadC 
Protein accessionYP_001480947 
Protein GI157372958 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0273728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCG TTATAAACAA GACGATTAAA TACAATGAAT ATGAAGGAAC GCTGGAAAAC 
ATTGACGATC CAGGTAACAC AATCTTGCTA GTCAAGCCTG CATGTAGGCT TTTGTCTATC
TTCGTAAGAA ATAATGATAT GCTCATTAAA CGCAAACAAC TGCTTGATGA AGTATGGGAG
GACTATGGAC TTAAAGCGAC AGACAGTAAC CTGAACAATT ATATCTCTGG TTTGAGAAGG
TCATTAGCAA AGTTTGATGA GGAAGAACTT ATAATCACCT ACCCAAGGCA GGGATTTAAA
TTCATCGCAA AAAAGATTGT CAGGCAGGAA GCCAATGCCA TACTGTCAGA AACAGACAGC
GTGGTTGAGC TAGAGAAAAA GGAGAGTATT AGGCCTGATG GCCCTAAAGA GGGGCAAAGA
CGAGCTTATT CCTGGCTAAA AAAAACTGCA TTACAGAAAA TGGCTGTCAT TACAGTTATA
TTGCTGCTAC CGTTTTTTTT AAGCATGGCC TACAAGCAGA TTCCGATCAG TAACATTACC
AATCTGGGCC AATACAAGAA TTGTGATATC TACTCAATCA AGTACAACGG CATGCAGCCA
AAAGAGATTG AGCATGTTAT CTCCAATCGT TACAGCTGCG AGGATAAAGC TAACGTTTAC
TACTACTTCA ATATTAAGGA AAAGAGCGTA TCCTCCCATG CTTCATTGAT CGCCTACTGC
CCATTAGATG TCACCACCTC ATGCGAGATT AGCTATATCA AAAGTTAG
 
Protein sequence
MIFVINKTIK YNEYEGTLEN IDDPGNTILL VKPACRLLSI FVRNNDMLIK RKQLLDEVWE 
DYGLKATDSN LNNYISGLRR SLAKFDEEEL IITYPRQGFK FIAKKIVRQE ANAILSETDS
VVELEKKESI RPDGPKEGQR RAYSWLKKTA LQKMAVITVI LLLPFFLSMA YKQIPISNIT
NLGQYKNCDI YSIKYNGMQP KEIEHVISNR YSCEDKANVY YYFNIKEKSV SSHASLIAYC
PLDVTTSCEI SYIKS