Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4726 |
Symbol | |
ID | 5603072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 5221986 |
End bp | 5222753 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640940292 |
Product | transcriptional regulator, CadC |
Protein accession | YP_001480947 |
Protein GI | 157372958 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0273728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTTCG TTATAAACAA GACGATTAAA TACAATGAAT ATGAAGGAAC GCTGGAAAAC ATTGACGATC CAGGTAACAC AATCTTGCTA GTCAAGCCTG CATGTAGGCT TTTGTCTATC TTCGTAAGAA ATAATGATAT GCTCATTAAA CGCAAACAAC TGCTTGATGA AGTATGGGAG GACTATGGAC TTAAAGCGAC AGACAGTAAC CTGAACAATT ATATCTCTGG TTTGAGAAGG TCATTAGCAA AGTTTGATGA GGAAGAACTT ATAATCACCT ACCCAAGGCA GGGATTTAAA TTCATCGCAA AAAAGATTGT CAGGCAGGAA GCCAATGCCA TACTGTCAGA AACAGACAGC GTGGTTGAGC TAGAGAAAAA GGAGAGTATT AGGCCTGATG GCCCTAAAGA GGGGCAAAGA CGAGCTTATT CCTGGCTAAA AAAAACTGCA TTACAGAAAA TGGCTGTCAT TACAGTTATA TTGCTGCTAC CGTTTTTTTT AAGCATGGCC TACAAGCAGA TTCCGATCAG TAACATTACC AATCTGGGCC AATACAAGAA TTGTGATATC TACTCAATCA AGTACAACGG CATGCAGCCA AAAGAGATTG AGCATGTTAT CTCCAATCGT TACAGCTGCG AGGATAAAGC TAACGTTTAC TACTACTTCA ATATTAAGGA AAAGAGCGTA TCCTCCCATG CTTCATTGAT CGCCTACTGC CCATTAGATG TCACCACCTC ATGCGAGATT AGCTATATCA AAAGTTAG
|
Protein sequence | MIFVINKTIK YNEYEGTLEN IDDPGNTILL VKPACRLLSI FVRNNDMLIK RKQLLDEVWE DYGLKATDSN LNNYISGLRR SLAKFDEEEL IITYPRQGFK FIAKKIVRQE ANAILSETDS VVELEKKESI RPDGPKEGQR RAYSWLKKTA LQKMAVITVI LLLPFFLSMA YKQIPISNIT NLGQYKNCDI YSIKYNGMQP KEIEHVISNR YSCEDKANVY YYFNIKEKSV SSHASLIAYC PLDVTTSCEI SYIKS
|
| |