Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B3983 |
Symbol | |
ID | 6796005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 3882692 |
End bp | 3883456 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642778100 |
Product | transcriptional regulatory protein, C |
Protein accession | YP_002148694 |
Protein GI | 197251321 |
COG category | [K] Transcription |
COG ID | [COG3710] DNA-binding winged-HTH domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATGGA TAATTAACGA TAATATTGAA TTTAATCCAG AAATGAATCG CCTGGCGTCA TTATCGAGGC CAGATCTCAA CATTATTCTG ACAACGCCCG CCAGCCGCTG CTTGCGCCTT CTGCTGGAAA ACGCCCCCTC CGTCGTCTCA CAACAAACAT TCTTTCAAAA AGTGTGGGAA GAAGACGGCA TGGTGGTGTC GGCAAATACG CTTTATCAGA ATATCTCCAT TATTCGCCGC GGATTACGTA CCGTTGGCGA AAATGAAGAT ACGCTGATAA TCACGGTTCC GCGTAGAGGC TTTCAGATTG AGCCTGGCGT GAGCCTCATG ACCATCCGCA AAGACTTCGC TCAGACAATA GAAAAAAAGG GTGAGACGCC GCCGCGTACG TCAGGGCGTT GGTTTAAACA TTATGTACCT GTACTTTGGA TGACCGGGAC ATTTGCTGTC GGTATTTTGC TTGGCACTAT CAGCTGGCAA ACCGTTCCCG ATAAGGATTT TTACGATCGC TACACGCTGG TTGAAACAAC TCAGGGCTGT CATTTTTTCT CGCGAAATGA AGATATCGAA AGCGGCAGCC GCTTTGCAAG CTATAAGTCA ATGATTCTAA AAACCGGTAT GGATTGTCAG AAATACCCAT GGGTCTATTT CCCTTCCAGC AGTCGCACCC CAGCGGTTAC GGCATTGATT TGTCAGCAAC CTTATAAAAC GCGCGGTGAT ACAGGCTGCG TGACGCTTTT TTTCCGCGGG GTGACACATG GGTAA
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Protein sequence | MLWIINDNIE FNPEMNRLAS LSRPDLNIIL TTPASRCLRL LLENAPSVVS QQTFFQKVWE EDGMVVSANT LYQNISIIRR GLRTVGENED TLIITVPRRG FQIEPGVSLM TIRKDFAQTI EKKGETPPRT SGRWFKHYVP VLWMTGTFAV GILLGTISWQ TVPDKDFYDR YTLVETTQGC HFFSRNEDIE SGSRFASYKS MILKTGMDCQ KYPWVYFPSS SRTPAVTALI CQQPYKTRGD TGCVTLFFRG VTHG
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